Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_B06
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.6
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 30 2.6
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 30 2.6
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 29 3.4
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 29 4.5
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 29 4.5
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 29 4.5
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 29 4.5
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 6.0
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 28 7.9
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 28 7.9
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 181 LTLHLRHANIRESESTVRILAXLQMNWIDXRLXWNA 288
L +L+ ++E E V ++ L W D RL WN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 142 IGSLPPXSKIVXNLTLH-----LRHANIRESESTVRILAXLQMNWIDXRLXWN 285
I S+PP +T++ L+H + E + I L+++W D RL WN
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWN 99
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 190 HLRHANIRESESTVRILAXLQMNWIDXRLXWN 285
H+ H +I + E T+ + + M W D L W+
Sbjct: 80 HIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 190 HLRHANIRESESTVRILAXLQMNWIDXRLXWN 285
H+ H +I + E T+ + + M W D L W+
Sbjct: 80 HIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 190 HLRHANIRESESTVRILAXLQMNWIDXRLXWNA 288
+L+ + E E V ++ L W D RL WNA
Sbjct: 81 NLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 190 HLRHANIRESESTVRILAXLQMNWIDXRLXWNAXA 294
+L+ ++E + + ++ + W D RL WNA A
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASA 114
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHA-NIRESESTVRILAXLQMNWIDXRLXWNAXAMG 300
PP + L L H I E + T+ +L + +W+D L W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHA-NIRESESTVRILAXLQMNWIDXRLXWNAXAMG 300
PP + L L H I E + T+ +L + +W+D L W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHA-NIRESESTVRILAXLQMNWIDXRLXWNAXAMG 300
PP + L L H I E + T+ +L + +W+D L W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHA-NIRESESTVRILAXLQMNWIDXRLXWNAXAMG 300
PP + L L H I E + T+ +L + +W+D L W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHA-NIRESESTVRILAXLQMNWIDXRLXWNAXAMG 300
PP + L L H I E + T+ +L + +W+D L W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHA-NIRESESTVRILAXLQMNWIDXRLXWNAXAMG 300
PP + L L H I E + T+ +L + +W+D L W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 154 PPXSKIVXNLTLHLRHANIRESESTVRILAXLQMNWIDXRLXWNAXAM-GLQHL 312
PP +++ + + L+ ++ E E V L W D RL WN G+ H+
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHI 103
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 323 SERLWRPDVVLLNAAATT-AGDYALRARVSNN 415
S +LWRPDV+L N+ + + Y+ R VS+N
Sbjct: 104 SFKLWRPDVLLFNSVSESFDSTYSSRFIVSSN 135
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 205 NIRESESTVRILAXLQMNWIDXRLXWNAXAMG---LQHLAG 318
++ E + + + L +W+D RL WN G L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,412,257
Number of Sequences: 27780
Number of extensions: 198864
Number of successful extensions: 421
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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