Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP18_FL5_B04
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    42   0.001

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
 Frame = +1

Query: 232 YSHWRDVFEHVRSTAKKKHYAXXNTXSGTPQERECSIRKSCNNVS--VTSMEDLXHEEIV 405
           +  ++++F     T +       N  +  P   EC    +   V+   T   ++  EEI 
Sbjct: 88  WQEFQELFLQRFETEETPAATFLNLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIA 147

Query: 406 TSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQEIKA 513
            + VLAH+A  D R   + FT+   TR+KL  E+KA
Sbjct: 148 VTTVLAHMANIDSRLQRVLFTSNVRTRSKLQAELKA 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,228,677
Number of Sequences: 53049
Number of extensions: 610800
Number of successful extensions: 1231
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)