Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_A21
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 65 9e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 9e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 40 3e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 9e-05
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 35 0.001
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.011
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.23
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 8.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.5
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.9 bits (151), Expect = 9e-13
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Frame = +2
Query: 92 CGRMRKRNITVPHDRLAPRN-VRSGVSPRTPKIVVNLTLHLRHA-NIRESESTVRILADL 265
CGR KR + ++ L+ N + V+ + + V + L+ ++ E + A L
Sbjct: 51 CGRHEKRLL---NELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWL 107
Query: 266 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSV 439
++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 440 SXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.9 bits (151), Expect = 9e-13
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Frame = +2
Query: 92 CGRMRKRNITVPHDRLAPRN-VRSGVSPRTPKIVVNLTLHLRHA-NIRESESTVRILADL 265
CGR KR + ++ L+ N + V+ + + V + L+ ++ E + A L
Sbjct: 51 CGRHEKRLL---NELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWL 107
Query: 266 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSV 439
++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 440 SXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 221 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 394
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 395 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
G Y V++NGS + + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 221 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 394
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 395 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
G Y V+++GS + + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 61.7 bits (143), Expect = 9e-12
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 164 VSPRTPKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVS 337
V T K+ VN L ++ N+ E ++ L+ W D +L W+ ++G +
Sbjct: 45 VQNMTEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLP 104
Query: 338 SERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPND 505
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 105 PDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFD 161
Query: 506 MQTCTFKFGSRMHNSDEMDFVI 571
QTC KFGS N D++ +
Sbjct: 162 QQTCIMKFGSWTFNGDQVSLAL 183
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 61.7 bits (143), Expect = 9e-12
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Frame = +2
Query: 182 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 352
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 353 RPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 523
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 524 KFGSRMHNSDEMDFVIDKRIYSM 592
FGS +H+ +E++ +DK+ + M
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHM 208
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 221 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 394
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 395 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
G Y V+++GS + + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 221 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 394
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 395 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
G Y V+++GS + + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 221 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 394
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 395 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
G Y V+++GS + + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 221 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 394
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 395 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 571
G Y V+++GS + + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.0 bits (134), Expect = 1e-10
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = +2
Query: 176 TPKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 352
T KI + L+ L N++ T + ++ +W D +L W+ E+G L V S+ +W
Sbjct: 51 TVKIKLKLS-QLIDVNLKNQIMTTNLW--VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIW 107
Query: 353 RPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 529
RPD+VL N A A +A ++ G V + + ++ +P D QTC KF
Sbjct: 108 RPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKF 167
Query: 530 GSRMHNSDEMD 562
GS ++ ++D
Sbjct: 168 GSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 436
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 437 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFXSG 604
+ + + + +P D Q C KFGS ++ ++D + I S +G
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 605 AW 610
W
Sbjct: 196 EW 197
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = +2
Query: 164 VSPRTPKIVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 331
V T + V L L L N++ T + ++ W D +L WN E+G L
Sbjct: 52 VMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYKLKWNPEEYGGVEMLY 109
Query: 332 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWP 499
V SE +W PD+VL N A G+Y + +A + G VS + + ++ +P
Sbjct: 110 VPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFP 166
Query: 500 NDMQTCTFKFGSRMHNSDEMD 562
D Q+C KFGS +N ++D
Sbjct: 167 FDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.8 bits (131), Expect = 2e-10
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Frame = +2
Query: 164 VSPRTPKIVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 331
VS +VV L L L N+++ T + L+ W D + W+ E+G T L
Sbjct: 39 VSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELY 96
Query: 332 VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 508
V SE +W PD+VL N A G + +A + G V + + + +P D
Sbjct: 97 VPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQ 156
Query: 509 QTCTFKFGSRMHNSDEMD 562
QTC KFGS ++ ++D
Sbjct: 157 QTCFMKFGSWTYDGIQID 174
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +2
Query: 182 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 355
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 356 PDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 532
PD+VL N A A +A + + G V + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 533 SRMHNSDEMD 562
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +2
Query: 182 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 355
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 356 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 523
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 524 KFGSRMHNSDEMD 562
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Frame = +2
Query: 179 PKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWR 355
P V + + +R I E + T + + +W+D+RL++ G+ + + R+W+
Sbjct: 28 PPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWK 87
Query: 356 PDVVLLNAAAT---TAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFK 526
PD N + T R+ +G V RL I M L+N+P D Q C +
Sbjct: 88 PDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQ 147
Query: 527 FGS 535
FGS
Sbjct: 148 FGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.8 bits (116), Expect = 2e-08
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = +2
Query: 164 VSPRTPKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWL 331
V + ++ V + L L N++ T + ++ W D +L WN ++G T
Sbjct: 39 VGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLH 96
Query: 332 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWP 499
V SE +W PD+VL N A G+Y + +A + + G V + + ++ +P
Sbjct: 97 VPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFP 153
Query: 500 NDMQTCTFKFGSRMHNSDEMD 562
D QTC KFGS ++ +D
Sbjct: 154 FDEQTCFMKFGSWTYDGYTVD 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.0 bits (114), Expect = 3e-08
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +2
Query: 191 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 367
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 368 L--LNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 535
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 536 RMHNSDEM 559
H S+E+
Sbjct: 180 WSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +2
Query: 185 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 361
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 362 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 535
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 536 RMHNSDEMD 562
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 9e-08
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Frame = +2
Query: 176 TPKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWR 355
TP +V L + E + + + +W D RLS+ S + ER+WR
Sbjct: 60 TPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWR 119
Query: 356 PDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFK 526
PD N + + R+S +G + RL I M+L N+P D Q+C
Sbjct: 120 PDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLI 179
Query: 527 FGS 535
GS
Sbjct: 180 LGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Frame = +2
Query: 158 SGVSPRTPKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTW 328
SG + +V + L +R A I + + + + W+D+RL +N G T
Sbjct: 50 SGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT- 108
Query: 329 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWP 499
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 500 NDMQTCTFKFGSRMHNSDEMDFV 568
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = +2
Query: 158 SGVSPRTPKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTW 328
SG + VV + + +R + I + + + W+D+RL +N G T
Sbjct: 50 SGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT- 108
Query: 329 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWP 499
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 500 NDMQTCTFKFGSRMHNSDEMDFV 568
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 224 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 403
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 404 ALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 535
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.9 bits (89), Expect = 3e-05
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Frame = +2
Query: 179 PKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSE---R 346
P + V +T++ L +++ E + + + W D RL++ G T V SE
Sbjct: 34 PPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKN 92
Query: 347 LWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 508
+W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P D
Sbjct: 93 IWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPMDR 149
Query: 509 QTCTFKFGS 535
Q C + S
Sbjct: 150 QLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +2
Query: 179 PKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSE---R 346
P + V +T++ L +++ E + + W D RL++ G T V SE
Sbjct: 34 PPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKN 92
Query: 347 LWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 508
+W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P D
Sbjct: 93 IWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPMDR 149
Query: 509 QTCTFKFGS 535
Q C + S
Sbjct: 150 QLCHIEIES 158
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 38.3 bits (85), Expect = 9e-05
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Frame = +2
Query: 137 LAPRNVRSGVSPRTPKIVVNLTLHLRHANIRE----SESTVRILAD--LQMNWIDKRLSW 298
+ P N + R PK + T+ H + +E ++ +AD L +W D RL
Sbjct: 9 ILPLNPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLAQSWRDSRLRL 68
Query: 299 --NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDI 463
N E + +WRPD NA T + ++ + ++ ++ + +L +
Sbjct: 69 PENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTL 128
Query: 464 STPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 568
+M+ +++P+D Q C+ S H + ++ F+
Sbjct: 129 VLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 275 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 427
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 428 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 535
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 341 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 511
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 512 TCTFKFGSRMHNSDEMDFVID 574
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.011
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTC 517
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 518 TFKFGSRMHNSDEM 559
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.014
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = +2
Query: 137 LAPRNVRSGVSPRTPKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGE 310
L+ R + + P + VN++ L L A+ ES + LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 311 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQ 484
+ + + +W PD ++ R+ NG+V+ + R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 485 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 568
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.014
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = +2
Query: 137 LAPRNVRSGVSPRTPKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGE 310
L+ R + + P + VN++ L L A+ ES + LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 311 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQ 484
+ + + +W PD ++ R+ NG+V+ + R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 485 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 568
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.014
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = +2
Query: 137 LAPRNVRSGVSPRTPKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGE 310
L+ R + + P + VN++ L L A+ ES + LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 311 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQ 484
+ + + +W PD ++ R+ NG+V+ + R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 485 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 568
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.018
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Frame = +2
Query: 185 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 358
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 359 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 532
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 533 SRMHNSDEMDFV 568
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.1 bits (57), Expect = 0.23
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Frame = +2
Query: 185 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 346
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 347 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPNDMQ 511
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 512 TCTFKFGSRMHNSDEM 559
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 8.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 630 WTDPSHPHAP 601
WT P+ PH+P
Sbjct: 444 WTTPTTPHSP 453
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 328 PSAAAPFPCVPTQS 287
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,272
Number of Sequences: 438
Number of extensions: 4526
Number of successful extensions: 85
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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