Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_P18
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z34802-8|CAH10787.1|  704|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    29   4.6  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   8.0  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   8.0  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = -3

Query: 632 KVSXVNIPGIALCNTDSPLRFVDIVIPCNTKFSHXIGLMWWLLAREVLRL 483
           + S V +P I+  NT+SPL+ +DI +PCN K    IGLMWW+LARE+L L
Sbjct: 136 EASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILIL 185



 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = -2

Query: 735 RLTPGVFINXIQVAXRELFFLIXLDXAQDHQPIXEGFIXQHSWDCFVQHRLPIKI 571
           R +PG   N IQ   +E   L+  D   DHQ + E          FV    P+K+
Sbjct: 102 RFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKL 156



 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 451 DVVVDLXXYRDPEESEKDEQQA 386
           +++ DL  YRDP E+EK+E  A
Sbjct: 201 EIMPDLYFYRDPTETEKEETGA 222


>Z34802-8|CAH10787.1|  704|Caenorhabditis elegans Hypothetical
           protein M88.5b protein.
          Length = 704

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 406 HFLQGHGXXTNQPQHPSAGHGEAHHESLSTSRANNHH 516
           H  QG+       QH +  H ++HH+S + ++  NH+
Sbjct: 128 HAQQGYHPHQQNQQHQAGQHQQSHHQSQNHNQHRNHN 164


>Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical
           protein M88.5a protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 406 HFLQGHGXXTNQPQHPSAGHGEAHHESLSTSRANNHH 516
           H  QG+       QH +  H ++HH+S + ++  NH+
Sbjct: 252 HAQQGYHPHQQNQQHQAGQHQQSHHQSQNHNQHRNHN 288


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 275 CCTRCSSCFWSTPCSRRMVCP 213
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/68 (27%), Positives = 20/68 (29%)
 Frame = +1

Query: 322 HSSLHGQEXXXXXXXXXXXXXXXXXHPFHFLQGHGXXTNQPQHPSAGHGEAHHESLSTSR 501
           HS  H  E                 H  H   GHG   + P H    HGE HH       
Sbjct: 414 HSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGH--HSPAH-HGHHGEHHHAPAHHGH 470

Query: 502 ANNHHIKP 525
              HH  P
Sbjct: 471 HGEHHHAP 478


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 226  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 321
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 545 TKFSHXIGLMWWLLA 501
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 226  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 321
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,287,668
Number of Sequences: 27780
Number of extensions: 244144
Number of successful extensions: 709
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)