Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_P11
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    34   0.62 
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    34   0.62 
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    34   0.62 
AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    31   4.4  
X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage f...    31   5.8  
X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.               31   5.8  
AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and polyadenyl...    31   5.8  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    30   7.7  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 33.9 bits (74), Expect = 0.62
 Identities = 18/56 (32%), Positives = 21/56 (37%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPP 525
           PPPP     +   PP    +   P G  PP      P G  PPP  G   +   PP
Sbjct: 366 PPPPPPAADYPTLPPPPLSQ---PTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPP 418


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 33.9 bits (74), Expect = 0.62
 Identities = 18/56 (32%), Positives = 21/56 (37%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPP 525
           PPPP     +   PP    +   P G  PP      P G  PPP  G   +   PP
Sbjct: 366 PPPPPPAADYPTLPPPPLSQ---PTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPP 418


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 33.9 bits (74), Expect = 0.62
 Identities = 18/56 (32%), Positives = 21/56 (37%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPP 525
           PPPP     +   PP    +   P G  PP      P G  PPP  G   +   PP
Sbjct: 366 PPPPPPAADYPTLPPPPLSQ---PTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPP 418


>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 18/56 (32%), Positives = 21/56 (37%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPP 525
           PPPP     +   PP    +   P G  PP      P G  PPP  G   +   PP
Sbjct: 38  PPPPPPAADYPTLPPPPLSQ---PTGGAPPP-PPPPPPGPPPPPFTGADGQPAIPP 89


>X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage
           factor I 68 kDa subunit protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/70 (30%), Positives = 22/70 (31%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPPLFXX 513
           PPPP         PP        P G  PP           PPP  G   +G  PP    
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPG-------QVLPPPLAGPPNRGDRPPPPVL 278

Query: 512 GGGXPXXWPP 483
             G P   PP
Sbjct: 279 FPGQPFGQPP 288


>X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/70 (30%), Positives = 22/70 (31%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPPLFXX 513
           PPPP         PP        P G  PP           PPP  G   +G  PP    
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPG-------QVLPPPLAGPPNRGDRPPPPVL 278

Query: 512 GGGXPXXWPP 483
             G P   PP
Sbjct: 279 FPGQPFGQPP 288


>AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and
           polyadenylation specific factor 6, 68 kD subunit variant
           protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/70 (30%), Positives = 22/70 (31%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXGGXXKGVSPPLFXX 513
           PPPP         PP        P G  PP           PPP  G   +G  PP    
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPPGPPPPG-------QVLPPPLAGPPNRGDRPPPPVL 278

Query: 512 GGGXPXXWPP 483
             G P   PP
Sbjct: 279 FPGQPFGQPP 288


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
 Frame = -3

Query: 692 PPPPXXKKXFXXXPPXXXXKXXXPXGXKPPXFXXGXPXGXFPPPXXG-GXXKGVSPPL 522
           PPPP     F   PP        P    PP    G P   +PPP    G    V PP+
Sbjct: 338 PPPPTYNPNFPPPPPRLPPTHAVPP-HPPPGL--GLPPASYPPPAVPPGGQPPVPPPI 392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,199,214
Number of Sequences: 237096
Number of extensions: 1504115
Number of successful extensions: 1636
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)