Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_O17
(780 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 135 6e-33
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 134 2e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 108 1e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 86 5e-18
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 78 1e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.061
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.24
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.99
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.99
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 28 1.3
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 3.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.0
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 27 4.0
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 26 5.3
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.3
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 26 7.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.0
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 9.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.2
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 135 bits (327), Expect = 6e-33
Identities = 70/128 (54%), Positives = 85/128 (66%)
Frame = -2
Query: 755 NQPGVFIPVLRVSVX*PKITXGSVNXS*PGFHPAPXGVXQXEVTXDIDANGIXNVSAIEK 576
NQPGV I V K G PAP GV Q EVT D+DANGI NVSA+EK
Sbjct: 432 NQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEK 491
Query: 575 STNKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 396
T K KITITNDK RLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S+++++
Sbjct: 492 GTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSL 551
Query: 395 EDEKLQGK 372
+D L+ K
Sbjct: 552 DDPNLKDK 559
Score = 69.7 bits (163), Expect = 4e-13
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = -3
Query: 385 SFKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 218
+ K+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 555 NLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 134 bits (323), Expect = 2e-32
Identities = 70/128 (54%), Positives = 84/128 (65%)
Frame = -2
Query: 755 NQPGVFIPVLRVSVX*PKITXGSVNXS*PGFHPAPXGVXQXEVTXDIDANGIXNVSAIEK 576
NQPGV I V K G PAP GV Q EVT D+DANGI NVSA+EK
Sbjct: 432 NQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEK 491
Query: 575 STNKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 396
T K KITITNDK RLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S+++++
Sbjct: 492 GTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSL 551
Query: 395 EDEKLQGK 372
+D L+ K
Sbjct: 552 DDPNLKDK 559
Score = 68.9 bits (161), Expect = 8e-13
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -3
Query: 385 SFKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 218
+ K+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 555 NLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 108 bits (259), Expect = 1e-24
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Frame = -2
Query: 668 GFHPAPXGVXQXEVTXDIDANGIXNVSAIEKS-TNKENKITITNDKXRLSKEEIERMVNE 492
G PAP GV Q EVT ++DANG+ VSA++KS K K+ I NDK RLS+E+IERMV E
Sbjct: 490 GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKE 549
Query: 491 AEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLQGK 372
AE++ ED KE I+A+N LE+Y +S+K +DE+L GK
Sbjct: 550 AEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGK 590
Score = 46.4 bits (105), Expect = 5e-06
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 373 KISDSDKQTILDKCNDTIKWLDSN-QLADKEEYEHKQKELEGICNPIITKMY 221
K+ DKQ +LD D +WL+ + + A KEE+E ++++L+ + +PI K+Y
Sbjct: 590 KVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1
Query: 726 EGERXMTKDNXWFGKXELTGIPP 658
EGER +TKDN GK +L GIPP
Sbjct: 471 EGERTLTKDNNLLGKFDLRGIPP 493
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 86.2 bits (204), Expect = 5e-18
Identities = 44/95 (46%), Positives = 60/95 (63%)
Frame = -2
Query: 668 GFHPAPXGVXQXEVTXDIDANGIXNVSAIEKSTNKENKITITNDKXRLSKEEIERMVNEA 489
G PAP G Q EV+ D+DA+GI NVSA +K+TNK++ IT+ L+ EIE MV +A
Sbjct: 504 GIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADA 562
Query: 488 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 384
EKYR D +KE I+ N ES C ++S ++ K
Sbjct: 563 EKYRASDMARKEAIENGNRAESVCTDIESNLDIHK 597
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 726 EGERXMTKDNXWFGKXELTGIPP 658
+GER + +DN G +LTGI P
Sbjct: 485 QGERELVRDNKLIGNFQLTGIAP 507
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 78.2 bits (184), Expect = 1e-15
Identities = 35/99 (35%), Positives = 60/99 (60%)
Frame = -2
Query: 668 GFHPAPXGVXQXEVTXDIDANGIXNVSAIEKSTNKENKITITNDKXRLSKEEIERMVNEA 489
G P P G + E T ++DANGI V+A+EK+T + I ITN LS +I+ M+ A
Sbjct: 466 GIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENA 525
Query: 488 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLQGK 372
+K++ +D + ++AK+ LESY ++++T+ + + K
Sbjct: 526 DKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMK 564
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 726 EGERXMTKDNXWFGKXELTGIPP 658
+GER +N G+ +LTGIPP
Sbjct: 447 QGERVNCAENEPLGEFQLTGIPP 469
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.061
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 578 KSTNKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 402
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 401 TMED 390
++D
Sbjct: 593 KLDD 596
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -2
Query: 662 HPAPXGVXQXEVTXDIDANGIXNVSAIEKSTNKENKITITNDKXRLSKEEIERMVNEAEK 483
HP E D NVS + S +E +T ++ R+ +EE +RM ++
Sbjct: 42 HPDVYDKLYGEQDLSKDLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLI 101
Query: 482 YRNEDDKQKE--TIQAKNA 432
E K+K T+Q +A
Sbjct: 102 KTIERTKRKRVTTVQGLDA 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.7 bits (61), Expect = 0.99
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 569 NKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 414
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKF 576
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 379 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 254
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -2
Query: 521 KEEIERMVNEAEKYRNEDDKQ-KETIQAKNAL 429
KEE+E+ + +K RNE+ K+ KET+ NAL
Sbjct: 684 KEEVEK--KDGDKERNEEKKEEKETLPVLNAL 713
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 593 VSAIEKSTNKENKITITNDKXRLSKEEIERMVNEAEKYRNED 468
VS ++S K + + K EE+E VNE E++R D
Sbjct: 259 VSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -2
Query: 563 ENKITITNDKXRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 387
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + + E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELL--E 341
Query: 386 KLQG 375
KL G
Sbjct: 342 KLTG 345
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 503 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 399
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 575 STNKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 414
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 536 KXRLSKEEIERMVNEAEKYRNEDD 465
K LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 210 EESPEVCRASRAEHPEPE 157
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 524 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 578 KSTNKENKITITNDKXRLSKEEIERMVNEAEKYRNEDDKQKET 450
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 7.0
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -2
Query: 581 EKSTNKENKITITNDKXRLSKEE-----IERMVNEAEKYRNEDDKQKETIQAKNALESYC 417
E+ KE + ++ D+ +L + + + N+ E + DDKQ + KN+LE+
Sbjct: 1239 EERFEKEKRRIMSEDRDKLIRGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETID 1298
Query: 416 FSMK--STMEDEKLQGKD 369
M+ S +E + G D
Sbjct: 1299 EKMEDASKIEGDAKTGDD 1316
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 199 RGLLRHPGTSSLLSDCKCLPILSA-CAH 279
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 608 NGIXNVSAIEKSTNKENKITITNDKXRLSKEEIERMVNEAEKYRNED 468
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,556,545
Number of Sequences: 5004
Number of extensions: 45538
Number of successful extensions: 242
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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