Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_O16
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 40 3e-04
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 33 0.047
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.43
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.76
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.8
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 26 5.4
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 26 5.4
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 5.4
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 26 7.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 7.1
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 26 7.1
SPBC21.03c |||DUF55 family protein|Schizosaccharomyces pombe|chr... 25 9.4
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 25 9.4
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 25 9.4
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 25 9.4
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 25 9.4
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 40.3 bits (90), Expect = 3e-04
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -3
Query: 508 FRLYDVERRGAVPASHLRDAXHSAGYTVN-AHVLNVLAHRYGTTDGYIQFDDFIMCAVRL 332
F+L+D ++ A+ LR A + G+ + VL +L T GY+Q +DF+ +
Sbjct: 43 FKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRV---M 99
Query: 331 KTMIANGEPLENLERELQQAP*DE 260
I +PLE ++R + DE
Sbjct: 100 TEKIVERDPLEEIKRAFELFDDDE 123
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 33.1 bits (72), Expect = 0.047
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -3
Query: 517 RAVFRLYDVERRGAVPASHLRDAXHSAGYTVNAHVLNVLAHRYGTTDGYIQFDDFIMCAV 338
+ F LYD+++ G +P SH+ S G V L L++ G +F F+ +
Sbjct: 12 KEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELGDAIDEKKFMSFVSNKL 71
Query: 337 R 335
R
Sbjct: 72 R 72
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.43
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 543 PCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGTYS 364
P + + P A T+ +G SP + T CT + ST T T PPT T S
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSS 366
Query: 363 SMT 355
+ T
Sbjct: 367 TST 369
Score = 29.1 bits (62), Expect = 0.76
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 543 PCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGTYS 364
P + + P A T+ +G SP + T CT + ST T T PPT + +
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSST 420
Query: 363 SM-TS*CAPCVSRP*SQT-ASRWRTSNVNCS 277
+ T+ C S P + T + + NC+
Sbjct: 421 PLTTTNCTTSTSVPYTSTPVTSTPLATTNCT 451
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 513 PCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGTYSSMT 355
P S +T + P P T T CT + ST T T PPT T S+ T
Sbjct: 265 PTSTSSTDTNSSPLP--TTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTST 315
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/89 (22%), Positives = 33/89 (37%)
Frame = -1
Query: 558 SKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPP 379
S S P G+ P T+ S PP + ++ T ++C + + PP
Sbjct: 342 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPP 401
Query: 378 TGTYSSMTS*CAPCVSRP*SQTASRWRTS 292
TG ++ + P S T + TS
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTS 430
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/76 (22%), Positives = 29/76 (38%)
Frame = -1
Query: 558 SKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPP 379
S S P G+ P T+ S PP + ++ T ++C + + PP
Sbjct: 288 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPP 347
Query: 378 TGTYSSMTS*CAPCVS 331
TG ++ + P S
Sbjct: 348 TGNSTTPVTPTVPPTS 363
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.76
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = -1
Query: 576 GSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWR 397
G G++S + S S+ T + + S P+T +T+ S+ T S +
Sbjct: 115 GGEGISSTTGSTFQSM-TTFTSSQTNSGHASASTSIPSTAITVTANSTIYSSATSSFPYS 173
Query: 396 TDTAPPTGTYSSMTS*CAPCVSRP*SQTASRWRTSNVNCSRRPETKPGAPSCN 238
TD + TGT + + + P S S ++ TS + S T G+P N
Sbjct: 174 TDVSVSTGTSTDIVTLPPPASST--SSFSTITNTSMIPSSSSFTTTTGSPYYN 224
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = -1
Query: 573 SGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRS----THTCST 406
S +S SSS S ++ P ++ T+ S S ++ + +RP++ S T + ST
Sbjct: 189 SSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSST 248
Query: 405 CWRTDTAPPTGTYSSMTS 352
T T P+ + SS +S
Sbjct: 249 FISTVTVTPSSSSSSTSS 266
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 26.2 bits (55), Expect = 5.4
Identities = 26/110 (23%), Positives = 45/110 (40%)
Frame = +2
Query: 101 DPACRPVEVKEGFGSAYEYTVRFSHSSSEKVA*SPPEDRELNVCL*LQEGAPGFVSGRLL 280
D P+ + +G+ A + V+ + S+ V SP L G+
Sbjct: 127 DKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDH 186
Query: 281 QFTFEVLQRLAVCDHGLETHGAHYEVIELYVPVGGAVSVRQHVEHVCVDR 430
V L+V D L+ +E+I++ VGG+V + V+ V VD+
Sbjct: 187 FANIAVDAVLSVAD--LQRKDVDFELIKVDGKVGGSVDDTKLVKGVVVDK 234
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1283
Score = 26.2 bits (55), Expect = 5.4
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Frame = -1
Query: 582 QDGSGGLASKSSSPCGSICAT--GGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCS 409
Q + G G++ T G +T G + + + T ST
Sbjct: 1036 QGTTSGTVEVVEPTAGTVTETIVSGSIPFTSTIPAQGTTSGTVEIVVPTAGTVTSTTGSG 1095
Query: 408 TCWRTDTAPPTGTYSS---MTS*CAP-CVSRP*SQTAS---RWRTSNVN 283
T W T T P TGT S + S AP C S P ++ + + + NVN
Sbjct: 1096 TSWFTTTVPATGTRSGSVIVVSPTAPACSSTPFAECPNLNFNFHSKNVN 1144
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = +2
Query: 548 ELFEASPPEPSCQ--ASR--SCYGXRP--WXNL 628
EL+EA P EPSCQ A+R C G P W L
Sbjct: 644 ELWEAIPVEPSCQDLANRVFECSGNTPVEWTRL 676
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 498 TTWSGGGPSPPATCVTLCTRPATRSTHTCST 406
TT GG P T +T P + + TCST
Sbjct: 283 TTIISGGHLEPVTDITYINNPPSNNIVTCST 313
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PPPLHVVQAEHGPPVAQIDPQGLELFEASPPEP 577
PPP+H EH PP P E E PP P
Sbjct: 209 PPPMHHKPGEHMPP----PPMHHEPGEHMPPPP 237
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PPPLHVVQAEHGPPVAQIDPQGLELFEASPPEP 577
PPP+H EH PP P E E PP P
Sbjct: 235 PPPMHHEPGEHMPP----PPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PPPLHVVQAEHGPPVAQIDPQGLELFEASPPEP 577
PPP+H EH PP P E E PP P
Sbjct: 261 PPPMHHEPGEHMPP----PPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PPPLHVVQAEHGPPVAQIDPQGLELFEASPPEP 577
PPP+H EH PP P E E PP P
Sbjct: 287 PPPMHHEPGEHMPP----PPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PPPLHVVQAEHGPPVAQIDPQGLELFEASPPEP 577
PPP+H EH PP P E E PP P
Sbjct: 313 PPPMHHEPGEHMPP----PPMHHEPGEHMPPPP 341
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 323 DRKRRAVGEPRT*TAAGAL--RRSPERPLVITNTRSTLDLRVETTP 192
D R EPR G L R S ERP + RS+ ++ E TP
Sbjct: 215 DPSDRVREEPREWVRRGPLPPRESSERPRLNLKPRSSSNVNTEATP 260
>SPBC21.03c |||DUF55 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 239
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 245 EGAPGFVSGRLLQFTFEVLQRL 310
EG P +V G + FTFE+L+ +
Sbjct: 16 EGEPRYVKGINVAFTFEMLEEI 37
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 480 PRRSTSYRRNTALQLRRSIHRDLNSSKPVLRSRLVKHRD 596
P +S S+RR L+ R +++ LN + + ++ V HRD
Sbjct: 286 PSKSFSFRRLQYLEGRWNMYMLLNEYQELADTKKVPHRD 324
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 312 ASRWRTSNVNCSRRPETKPGAPSCNHKHTFNSRSSGGDY 196
ASR +++ + S P + PS + ++SR SGG Y
Sbjct: 301 ASRPPSNHPHSSNYPSSSRRKPSPDRYSNYSSRGSGGRY 339
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 573 SGGLASKSSSPCGSICATGGPCSACTTW 490
+G +++ + SP GS+CA+GG W
Sbjct: 192 TGYVSAVTISPDGSLCASGGRDGTLMLW 219
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 201 DYATFSLEEWLNRTVYS*AEPNP 133
DYA F LEEW + +P P
Sbjct: 336 DYAIFQLEEWRKEWCHLWEQPEP 358
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,711,005
Number of Sequences: 5004
Number of extensions: 54144
Number of successful extensions: 172
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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