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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_O16
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006676-5|AAK71383.2|  172|Caenorhabditis elegans Hypothetical ...    59   4e-09
AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical ...    34   0.13 
Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical pr...    33   0.23 
AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C pr...    33   0.23 
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    33   0.31 
AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical...    31   0.71 
U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified vi...    31   0.94 
CU457740-1|CAM36331.1|  122|Caenorhabditis elegans Hypothetical ...    31   0.94 
AC006777-5|AAK72311.1|  247|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   5.0  
AF003386-13|AAB54250.1|  311|Caenorhabditis elegans Blistered cu...    29   5.0  
AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z82059-12|CAB04880.1|  622|Caenorhabditis elegans Hypothetical p...    28   8.8  
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z49938-3|CAA90188.1|  306|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U80023-6|AAG24045.1|  306|Caenorhabditis elegans Serpentine rece...    28   8.8  
U80023-5|AAG24040.1|  315|Caenorhabditis elegans Serpentine rece...    28   8.8  
AL032665-2|CAA21772.1|  622|Caenorhabditis elegans Hypothetical ...    28   8.8  

>AC006676-5|AAK71383.2|  172|Caenorhabditis elegans Hypothetical
           protein M04F3.4 protein.
          Length = 172

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = -3

Query: 559 FEEFKSLWIDLRNWRAVFRLYDVERRGAVPASHLRDAXHSAGYTVNAHVLNVLAHRYGTT 380
           F+EF++LW  + +W   FR +D +  G +  S L +A    GY ++    N+L H++  +
Sbjct: 62  FQEFQALWRYINDWTNCFRGFDTDGSGNIDKSELTNALTQFGYRLSPQFYNILMHKFDRS 121

Query: 379 -DGYIQFDDFIMCAVRLKTMIA 317
               I FDDFI   V L+T+ A
Sbjct: 122 HSNRINFDDFIQLCVVLQTLTA 143


>AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical
           protein Y41D4B.16 protein.
          Length = 453

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 23/73 (31%), Positives = 34/73 (46%)
 Frame = -1

Query: 573 SGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRT 394
           S  L+S +S+P  +  AT    +  TT +G   + PAT     +RP T S  T  T    
Sbjct: 369 SAALSSTASTPSIASTATSAATNPPTTTAGASTNSPATNPPTTSRPITASQST--TSQNV 426

Query: 393 DTAPPTGTYSSMT 355
           +T    G  +S+T
Sbjct: 427 ETTTKLGLTASIT 439


>Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical
           protein ZK673.7 protein.
          Length = 160

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 517 RAVFRLYDVERRGAVPASHLRDAXHSAGYTVNAHVLN-VLAHRYGTTDGYIQFDDFI 350
           R  FRLYD E  G +  S LRD   +    V+   L+ ++A       G + FD+F+
Sbjct: 98  REAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFM 154


>AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C
           protein.
          Length = 160

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 517 RAVFRLYDVERRGAVPASHLRDAXHSAGYTVNAHVLN-VLAHRYGTTDGYIQFDDFI 350
           R  FRLYD E  G +  S LRD   +    V+   L+ ++A       G + FD+F+
Sbjct: 98  REAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFM 154


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 25/103 (24%), Positives = 39/103 (37%)
 Frame = -1

Query: 552 SSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTG 373
           +++P  +   T    +  TT      + P T  T  T   T  T T +T   T TAP T 
Sbjct: 140 TTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTT 199

Query: 372 TYSSMTS*CAPCVSRP*SQTASRWRTSNVNCSRRPETKPGAPS 244
           T +  T+   P  +     T +   T+    +  P T    P+
Sbjct: 200 TTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPT 242



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -1

Query: 474 SPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGTYSSMTS*CAPCVSRP*SQTASRWRT 295
           +P  T     T P T +T T +T   T T P T T +  T+   P  +     T +   T
Sbjct: 131 TPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT 190

Query: 294 SNVNCSRRPETKP 256
           +         T P
Sbjct: 191 TTTTAPTTTTTTP 203


>AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical
           protein T21D12.7 protein.
          Length = 646

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 150 TSILCDSATPRARRW--RSLHPKIES*TCVCDYKRALRASSQGACCSSRSRFSNGSPFAI 323
           + I+C    P A R+   ++   +E   C  +Y    +   +GACC S+  F  G+PF I
Sbjct: 176 SEIICPRGEPHADRYSINNIATCMEDKHCPRNYTCTSKVGKKGACCPSK-EFVCGTPFEI 234


>U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 2 protein.
          Length = 156

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 517 RAVFRLYDVERRGAVPASHLRDAXHSAGYTV-NAHVLNVLAHRYGTTDGYIQFDDFIMCA 341
           +AVF   DV+  G +  S LR A    G+++ +  +  +  H     DG I F +F    
Sbjct: 93  KAVFEELDVDGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQNNDGKINFQEFCEMM 152

Query: 340 VRLK 329
            R K
Sbjct: 153 TRKK 156


>CU457740-1|CAM36331.1|  122|Caenorhabditis elegans Hypothetical
           protein C50E10.1 protein.
          Length = 122

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 492 WSGGGPSPPATCVTLCTRPATRSTHTCSTCW 400
           W+   P+PPAT  T  T P       C  CW
Sbjct: 58  WNIPSPNPPATSATSSTSPEEEIPCICFNCW 88


>AC006777-5|AAK72311.1|  247|Caenorhabditis elegans Hypothetical
           protein Y46H3D.8 protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -1

Query: 561 ASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTC 403
           AS SSS C S  A     SAC +W+  G      C       ATR ++  +TC
Sbjct: 199 ASSSSSSCTSYTADSS--SACASWAANG-----FCTNTFYTAATRKSYCATTC 244


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = -1

Query: 576 GSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATC 457
           G GG  +   +PCG  C  GG    C    G  P PPA C
Sbjct: 43  GGGGGCAPPPAPCGGGCGGGG--GGCGGGGGCAP-PPAPC 79


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = -1

Query: 576 GSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATC 457
           G GG  +   +PCG  C  GG    C    G  P PPA C
Sbjct: 43  GGGGGCAPPPAPCGGGCGGGG--GGCGGGGGCAP-PPAPC 79


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -1

Query: 576  GSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRST 421
            G GG  S   + CG  C +GG C       GGG      C + C +P T +T
Sbjct: 2133 GCGGGCSGGGNSCGGGCNSGGSCGG----GGGG------CSSSCCQPQTSAT 2174


>Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical
           protein M163.8 protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
 Frame = -1

Query: 573 SGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTH---TCSTC 403
           SG  ++ SSS   S    G   S C +W+  G      C +    PA +S +   TC+ C
Sbjct: 59  SGASSTTSSSASSSSSTCGDSNSNCASWASNG-----FCNSTFYTPAQKSQYCGATCNLC 113

Query: 402 WRTDTAPPTGTYSSMTS 352
                   +G  +S T+
Sbjct: 114 GGASVETSSGVAASTTA 130


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = -1

Query: 558  SKSSSPCGSIC-ATGGPCSACTTWSGGGP---SPPATCVTLCTRPATRSTHTCSTCWRTD 391
            S SS+  GS C     P +A  T+S G     S   T    C   AT +  + S+C    
Sbjct: 1178 SGSSTAVGSQCIGVIVPTNAQVTYSDGSMVLHSAGTTATLTCLNSATLTGSSYSSCSNGV 1237

Query: 390  TAPPTGTYSSMTS*CAPCVSRP 325
              P  G+ +S  +   PC + P
Sbjct: 1238 WTPTLGSCTSSGTGTGPCYTPP 1259


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -1

Query: 522 TGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGTYSSMTS 352
           T  P +  TT +    +P  T  T  T P T +T + +T   + T P T T +  T+
Sbjct: 266 TTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTT 322


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
            K04H4.2c protein.
          Length = 1446

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/63 (28%), Positives = 22/63 (34%)
 Frame = -1

Query: 579  DGSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCW 400
            DG GG+        G  C TG  C    +   GG     T   LC    T   + C +  
Sbjct: 1021 DGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLCPTGYTVQGNLCCSAT 1080

Query: 399  RTD 391
             TD
Sbjct: 1081 CTD 1083


>Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical
           protein K04H4.2b protein.
          Length = 788

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/63 (28%), Positives = 22/63 (34%)
 Frame = -1

Query: 579 DGSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCW 400
           DG GG+        G  C TG  C    +   GG     T   LC    T   + C +  
Sbjct: 363 DGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLCPTGYTVQGNLCCSAT 422

Query: 399 RTD 391
            TD
Sbjct: 423 CTD 425


>Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical
           protein K04H4.2a protein.
          Length = 628

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/63 (28%), Positives = 22/63 (34%)
 Frame = -1

Query: 579 DGSGGLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCW 400
           DG GG+        G  C TG  C    +   GG     T   LC    T   + C +  
Sbjct: 363 DGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLCPTGYTVQGNLCCSAT 422

Query: 399 RTD 391
            TD
Sbjct: 423 CTD 425


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 27/96 (28%), Positives = 35/96 (36%)
 Frame = -1

Query: 663 TAQPTPRSRVQVRFXQGRXP*HDRDA*QDGSGGLASKSSSPCGSICATGGPCSACTTWSG 484
           TAQ TP S V     Q              S    + S+SP  S   T     +  T S 
Sbjct: 325 TAQATPSSSVIPTTTQTTQRPTSTGIPSTVSTSQGTSSTSPIPSTTQTSSSAPSTYT-SN 383

Query: 483 GGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPT 376
             PSP  T +T    P+T+   T S     ++ P T
Sbjct: 384 FTPSPTTTLLTSTIAPSTQGVPTSSKSSSPNSTPTT 419


>AF003386-13|AAB54250.1|  311|Caenorhabditis elegans Blistered
           cuticle protein 2 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -1

Query: 561 ASKSSSPCGSICATGGPCSACTTWSGGGPSPP 466
           A    S   S  A GG C +C T   G P PP
Sbjct: 98  AESGFSSSKSSLAPGGQCCSCKTGPSGPPGPP 129


>AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical
           protein Y24D9A.6 protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 282 CSRRPETKPGAPSCNHKHTFNSRSSGGDYATFSLEEWLNRTVYS*AEPN 136
           C  R + K     C+HK T        D    +  EW  RT  S  EPN
Sbjct: 107 CLERKKKKKKGIYCHHKTTVGEGEDDEDEDEKTQREWERRTRNSVCEPN 155


>Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -1

Query: 513 PCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGT 370
           P +A   W    P P      +  +  T +T T ST   T T PPT T
Sbjct: 190 PLNADAEWKPPPPPPMPGKPPIVPQSPTTTTSTTSTTTTTATRPPTTT 237


>Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -1

Query: 513 PCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCSTCWRTDTAPPTGT 370
           P +A   W    P P      +  +  T +T T ST   T T PPT T
Sbjct: 190 PLNADAEWKPPPPPPMPGKPPIVPQSPTTTTSTTSTTTTTATRPPTTT 237


>Z82059-12|CAB04880.1|  622|Caenorhabditis elegans Hypothetical
           protein T27E9.7 protein.
          Length = 622

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 208 GWRLRHLLARGVAESHSILVSGTEPLLNFDRPAC-WIPSTL 89
           GWR+R  LAR +    S+L+   EP  + D  AC W+   L
Sbjct: 230 GWRMRIALARALFLKPSVLLL-DEPTNHLDLEACVWLEEEL 269


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 561 ASKSSSPCGSICATGGP-CSACTTWSGGGPSPPATCVTLCTRPATRSTHTCST 406
           +++ +  C SI  + GP CS+C +      + P TC+  C R     ++ C+T
Sbjct: 74  SNQCNQQCTSITISSGPSCSSCQSACSSACTTP-TCIRTCQR--NSCSNLCNT 123


>Z49938-3|CAA90188.1|  306|Caenorhabditis elegans Hypothetical
           protein F38A3.2 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 525 ATGGPCSACTTWSGGGPSPPAT 460
           ++GG C +C   + G P PP T
Sbjct: 106 SSGGSCCSCKAGASGPPGPPGT 127


>U80023-6|AAG24045.1|  306|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 29 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 190 LLARGVAESHSILVSGTEPLLNFDRPACWIPSTLL 86
           ++ R + +  SILV  T P  NF + AC++   L+
Sbjct: 57  VIQRIITDGSSILVIPTGPCTNFGKTACYVGHMLM 91


>U80023-5|AAG24040.1|  315|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 31 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 190 LLARGVAESHSILVSGTEPLLNFDRPACWIPSTLL 86
           ++ R + +  +ILV  T P +NF + AC++   L+
Sbjct: 57  VMQRIITDGSTILVIPTGPCINFGKTACYVGHMLM 91


>AL032665-2|CAA21772.1|  622|Caenorhabditis elegans Hypothetical
           protein T27E9.7 protein.
          Length = 622

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 208 GWRLRHLLARGVAESHSILVSGTEPLLNFDRPAC-WIPSTL 89
           GWR+R  LAR +    S+L+   EP  + D  AC W+   L
Sbjct: 230 GWRMRIALARALFLKPSVLLL-DEPTNHLDLEACVWLEEEL 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,154,563
Number of Sequences: 27780
Number of extensions: 370560
Number of successful extensions: 1318
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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