Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_O12
         (1296 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       33   0.49 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   8.0  
08_02_1317 + 26095772-26096191,26096301-26096540,26096647-260967...    29   8.0  
01_05_0490 + 22672241-22674679                                         29   8.0  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 33.1 bits (72), Expect = 0.49
 Identities = 17/54 (31%), Positives = 18/54 (33%)
 Frame = +3

Query: 399 PPPPXXXGGGXXXXXXXXXXXXXXXXXXGGGGXXXXYGXXXGGIFLXKXPPPXF 560
           PPPP   GGG                  GGGG     G   GG +    PP  F
Sbjct: 93  PPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNPF 146


>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = -2

Query: 1271 PPXXPPPXXXHXXXXXXXXXXXKXXXXXXFXPXXPPPPXPPSL 1143
            PP  PPP                        P  PPPP PPSL
Sbjct: 603  PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSL 645


>08_02_1317 +
           26095772-26096191,26096301-26096540,26096647-26096712,
           26096836-26096904,26097004-26097075,26097164-26097382,
           26097480-26097581
          Length = 395

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +3

Query: 483 GGGGXXXXYGXXXGGIFLXKXPPPXFFXXGG 575
           GGGG    YG    G+F    P P  F  GG
Sbjct: 67  GGGGVGQRYGGAGAGLFGMPPPAPGDFAGGG 97


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = -2

Query: 1271 PPXXPPPXXXHXXXXXXXXXXXKXXXXXXFXPXXPPPPXPPS 1146
            PP  PPP               K        P  PPPP PP+
Sbjct: 607  PPPPPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPT 648


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,383,768
Number of Sequences: 37544
Number of extensions: 282282
Number of successful extensions: 2394
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4038959244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)