Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_O08
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   315   4e-86
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   315   4e-86
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   315   4e-86
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   315   4e-86
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   315   4e-86

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  315 bits (774), Expect = 4e-86
 Identities = 148/190 (77%), Positives = 159/190 (83%)
 Frame = -1

Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
           F QDEMIDC+GVT+ KG+KGV                  KVACIGAWHPSRVS TVARAG
Sbjct: 222 FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 281

Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
           QKGYHHRTE+NKKIYRIG  IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDF
Sbjct: 282 QKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDF 341

Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
           VMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG
Sbjct: 342 VMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 401

Query: 124 TLKKDRIREE 95
            LKKDR++EE
Sbjct: 402 PLKKDRLKEE 411



 Score = 35.9 bits (79), Expect = 0.059
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2

Query: 723 EDKVKWAREHLEKXIPVDS 667
           EDKVKWAREHLEK I V +
Sbjct: 202 EDKVKWAREHLEKPIQVSN 220


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  315 bits (774), Expect = 4e-86
 Identities = 148/190 (77%), Positives = 159/190 (83%)
 Frame = -1

Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
           F QDEMIDC+GVT+ KG+KGV                  KVACIGAWHPSRVS TVARAG
Sbjct: 211 FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 270

Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
           QKGYHHRTE+NKKIYRIG  IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDF
Sbjct: 271 QKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDF 330

Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
           VMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG
Sbjct: 331 VMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390

Query: 124 TLKKDRIREE 95
            LKKDR++EE
Sbjct: 391 PLKKDRLKEE 400



 Score = 35.9 bits (79), Expect = 0.059
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2

Query: 723 EDKVKWAREHLEKXIPVDS 667
           EDKVKWAREHLEK I V +
Sbjct: 191 EDKVKWAREHLEKPIQVSN 209


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  315 bits (774), Expect = 4e-86
 Identities = 148/190 (77%), Positives = 159/190 (83%)
 Frame = -1

Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
           F QDEMIDC+GVT+ KG+KGV                  KVACIGAWHPSRVS TVARAG
Sbjct: 198 FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 257

Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
           QKGYHHRTE+NKKIYRIG  IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDF
Sbjct: 258 QKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDF 317

Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
           VMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG
Sbjct: 318 VMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 377

Query: 124 TLKKDRIREE 95
            LKKDR++EE
Sbjct: 378 PLKKDRLKEE 387



 Score = 35.9 bits (79), Expect = 0.059
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2

Query: 723 EDKVKWAREHLEKXIPVDS 667
           EDKVKWAREHLEK I V +
Sbjct: 178 EDKVKWAREHLEKPIQVSN 196


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  315 bits (774), Expect = 4e-86
 Identities = 148/190 (77%), Positives = 159/190 (83%)
 Frame = -1

Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
           F QDEMIDC+GVT+ KG+KGV                  KVACIGAWHPSRVS TVARAG
Sbjct: 198 FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 257

Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
           QKGYHHRTE+NKKIYRIG  IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDF
Sbjct: 258 QKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDF 317

Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
           VMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG
Sbjct: 318 VMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 377

Query: 124 TLKKDRIREE 95
            LKKDR++EE
Sbjct: 378 PLKKDRLKEE 387



 Score = 35.9 bits (79), Expect = 0.059
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2

Query: 723 EDKVKWAREHLEKXIPVDS 667
           EDKVKWAREHLEK I V +
Sbjct: 178 EDKVKWAREHLEKPIQVSN 196


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  315 bits (774), Expect = 4e-86
 Identities = 148/190 (77%), Positives = 159/190 (83%)
 Frame = -1

Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
           F QDEMIDC+GVT+ KG+KGV                  KVACIGAWHPSRVS TVARAG
Sbjct: 211 FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 270

Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
           QKGYHHRTE+NKKIYRIG  IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDF
Sbjct: 271 QKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDF 330

Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
           VMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG
Sbjct: 331 VMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390

Query: 124 TLKKDRIREE 95
            LKKDR++EE
Sbjct: 391 PLKKDRLKEE 400



 Score = 35.9 bits (79), Expect = 0.059
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2

Query: 723 EDKVKWAREHLEKXIPVDS 667
           EDKVKWAREHLEK I V +
Sbjct: 191 EDKVKWAREHLEKPIQVSN 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,193,898
Number of Sequences: 53049
Number of extensions: 689414
Number of successful extensions: 1726
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1721
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)