Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_O08
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 248 2e-66
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 248 2e-66
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 248 2e-66
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 248 2e-66
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 248 2e-66
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 248 2e-66
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 240 9e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 240 9e-64
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL024499-4|CAC42317.1| 617|Caenorhabditis elegans Hypothetical ... 28 6.1
AF031839-1|AAC13675.1| 617|Caenorhabditis elegans GLY6b protein. 28 6.1
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 248 bits (608), Expect = 2e-66
Identities = 121/189 (64%), Positives = 142/189 (75%)
Frame = -1
Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
FAQDEMID IGVTR G+KGV KVACIGAWHPSRV+FTVARAG
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 271 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 327
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 328 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 388 KLKRDFLAE 396
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 729 TXEDKVKWAREHLEKXIPVDS 667
T E KV WAREHLEK + VD+
Sbjct: 189 TIEQKVDWAREHLEKQVQVDT 209
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 248 bits (608), Expect = 2e-66
Identities = 121/189 (64%), Positives = 142/189 (75%)
Frame = -1
Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
FAQDEMID IGVTR G+KGV KVACIGAWHPSRV+FTVARAG
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 271 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 327
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 328 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 388 KLKRDFLAE 396
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 729 TXEDKVKWAREHLEKXIPVDS 667
T E KV WAREHLEK + VD+
Sbjct: 189 TIEQKVDWAREHLEKQVQVDT 209
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 248 bits (608), Expect = 2e-66
Identities = 121/189 (64%), Positives = 142/189 (75%)
Frame = -1
Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
FAQDEMID IGVTR G+KGV KVACIGAWHPSRV+FTVARAG
Sbjct: 113 FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 172
Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 173 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 229
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 230 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 289
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 290 KLKRDFLAE 298
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 729 TXEDKVKWAREHLEKXIPVDS 667
T E KV WAREHLEK + VD+
Sbjct: 91 TIEQKVDWAREHLEKQVQVDT 111
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 248 bits (608), Expect = 2e-66
Identities = 121/189 (64%), Positives = 142/189 (75%)
Frame = -1
Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
FAQDEMID IGVTR G+KGV KVACIGAWHPSRV+FTVARAG
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 271 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 327
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 328 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 388 KLKRDFLAE 396
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 729 TXEDKVKWAREHLEKXIPVDS 667
T E KV WAREHLEK + VD+
Sbjct: 189 TIEQKVDWAREHLEKQVQVDT 209
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 248 bits (608), Expect = 2e-66
Identities = 121/189 (64%), Positives = 142/189 (75%)
Frame = -1
Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
FAQDEMID IGVTR G+KGV KVACIGAWHPSRV+FTVARAG
Sbjct: 113 FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 172
Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 173 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 229
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 230 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 289
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 290 KLKRDFLAE 298
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 729 TXEDKVKWAREHLEKXIPVDS 667
T E KV WAREHLEK + VD+
Sbjct: 91 TIEQKVDWAREHLEKQVQVDT 111
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 248 bits (608), Expect = 2e-66
Identities = 121/189 (64%), Positives = 142/189 (75%)
Frame = -1
Query: 664 FAQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAG 485
FAQDEMID IGVTR G+KGV KVACIGAWHPSRV+FTVARAG
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Query: 484 QKGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 271 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 327
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 328 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 388 KLKRDFLAE 396
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 729 TXEDKVKWAREHLEKXIPVDS 667
T E KV WAREHLEK + VD+
Sbjct: 189 TIEQKVDWAREHLEKQVQVDT 209
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 240 bits (587), Expect = 9e-64
Identities = 117/188 (62%), Positives = 139/188 (73%)
Frame = -1
Query: 661 AQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAGQ 482
A +MID IGVTR G+KGV KVACIGAWHPSRV+FTVARAGQ
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 223
Query: 481 KGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 302
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 224 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 280
Query: 301 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 122
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 281 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 340
Query: 121 LKKDRIRE 98
LK+D + E
Sbjct: 341 LKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 240 bits (587), Expect = 9e-64
Identities = 117/188 (62%), Positives = 139/188 (73%)
Frame = -1
Query: 661 AQDEMIDCIGVTRXKGYKGVXXXXXXXXXXXXXXXXXXKVACIGAWHPSRVSFTVARAGQ 482
A +MID IGVTR G+KGV KVACIGAWHPSRV+FTVARAGQ
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 223
Query: 481 KGYHHRTEMNKKIYRIGQRIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 302
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 224 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 280
Query: 301 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 122
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 281 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 340
Query: 121 LKKDRIRE 98
LK+D + E
Sbjct: 341 LKRDFLAE 348
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +2
Query: 11 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 130
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
>AL024499-4|CAC42317.1| 617|Caenorhabditis elegans Hypothetical
protein H38K22.5b protein.
Length = 617
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 599 SDTFVSFXPGDTNAVNHFILGKPESTG 679
S+ +F PGDT NH +LG P + G
Sbjct: 481 SNYCTAFRPGDTGPKNHRLLGSPCTMG 507
>AF031839-1|AAC13675.1| 617|Caenorhabditis elegans GLY6b protein.
Length = 617
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 599 SDTFVSFXPGDTNAVNHFILGKPESTG 679
S+ +F PGDT NH +LG P + G
Sbjct: 481 SNYCTAFRPGDTGPKNHRLLGSPCTMG 507
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,128,329
Number of Sequences: 27780
Number of extensions: 361184
Number of successful extensions: 930
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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