Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_O03
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 239 2e-63
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 31 1.2
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.0
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 239 bits (584), Expect = 2e-63
Identities = 116/207 (56%), Positives = 139/207 (67%), Gaps = 1/207 (0%)
Frame = -1
Query: 743 VVIRDPGNVIGKHRKNHXSESRRF*XNPXTTW-EGNTGHPVFATRYGKIAVNXCFGRHHV 567
VVI G VIG+ RKNH F N T + E GHPVF T+YG+I +N C+GRHH
Sbjct: 184 VVISHTGRVIGRSRKNHIPRVGDF--NESTYYMESTLGHPVFETKYGRIGINICYGRHHP 241
Query: 566 LNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNE 387
NWMM+ NGAEI+FNPSAT+ SE +W +EARNAAI N FT INRVG E FPNE
Sbjct: 242 QNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTEVFPNE 299
Query: 386 FTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYY 207
FTS +G+PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +D +
Sbjct: 300 FTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKDAWGFR 359
Query: 206 MTQRLDMYVNSLSKVLELDYKPQVVHE 126
MT RLDMY +++V DY+P + E
Sbjct: 360 MTNRLDMYAQKITEVSNPDYRPDIRRE 386
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +3
Query: 462 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEAXVHRDLAVSGREYRMAGV 641
SFNV + + G++R + + ++ + +H +QD+ P+ + RD + ++AG+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPT-PFMSRDELIDNSVRKLAGM 79
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
protein T24A11.1b protein.
Length = 1006
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 662 PXTTWEGNTGHPVFATR-YGKIAVNXCFGRHHVLN 561
P TTWEG +GH + + + K++V +HH N
Sbjct: 813 PNTTWEGESGHCAYCKKEFNKLSVYVEDRQHHCRN 847
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical
protein T24A11.1a protein.
Length = 938
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 662 PXTTWEGNTGHPVFATR-YGKIAVNXCFGRHHVLN 561
P TTWEG +GH + + + K++V +HH N
Sbjct: 786 PNTTWEGESGHCAYCKKEFNKLSVYVEDRQHHCRN 820
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 662 PXTTWEGNTGHPVFATR-YGKIAVNXCFGRHHVLN 561
P TTWEG +GH + + + K++V +HH N
Sbjct: 813 PNTTWEGESGHCAYCKKEFNKLSVYVEDRQHHCRN 847
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 176 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 283
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,296,047
Number of Sequences: 27780
Number of extensions: 329062
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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