Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_N13
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II p...    31   5.7  
U03643-1|AAA03571.1|  235|Homo sapiens leukophysin protein.            31   5.7  
L13848-1|AAB48855.1| 1279|Homo sapiens RNA helicase A protein.         31   5.7  
BC107881-1|AAI07882.1|  443|Homo sapiens DHX9 protein protein.         31   5.7  
BC058896-1|AAH58896.1|  402|Homo sapiens DHX9 protein protein.         31   5.7  
AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    31   5.7  
AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    31   5.7  

>Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II
            protein.
          Length = 1270

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463  GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
            G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 1145 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 1198


>U03643-1|AAA03571.1|  235|Homo sapiens leukophysin protein.
          Length = 235

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463 GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
           G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 110 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 163


>L13848-1|AAB48855.1| 1279|Homo sapiens RNA helicase A protein.
          Length = 1279

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463  GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
            G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 1144 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 1197


>BC107881-1|AAI07882.1|  443|Homo sapiens DHX9 protein protein.
          Length = 443

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463 GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
           G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 318 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 371


>BC058896-1|AAH58896.1|  402|Homo sapiens DHX9 protein protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463 GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
           G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 277 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 330


>AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
            polypeptide 9 protein.
          Length = 1270

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463  GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
            G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 1145 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 1198


>AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
            polypeptide 9 protein.
          Length = 1270

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463  GAKLVIHHSLENKGAKPPLXMPSDEGVRYADGASD-NNGGFNPGANSFXYGVXG 621
            G  L+I  +    G +PP     D G  Y  G S  + GG+  G +S  YG  G
Sbjct: 1145 GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGG 1198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,088,627
Number of Sequences: 237096
Number of extensions: 1791857
Number of successful extensions: 4229
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4222
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)