Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_N07
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 245 2e-65
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 245 2e-65
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 245 2e-65
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 245 2e-65
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 245 2e-65
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 245 2e-65
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 242 2e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 242 2e-64
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 245 bits (600), Expect = 2e-65
Identities = 123/203 (60%), Positives = 148/203 (72%)
Frame = -2
Query: 708 REHLENPIPVDXVXCPR*ND*LHWCHQGQRDTKVSXXVGTQRXYPRKTHKGLRKVACIGA 529
REHLE + VD V +G V+ T++ PRKTHKGLRKVACIGA
Sbjct: 198 REHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-PRKTHKGLRKVACIGA 256
Query: 528 WHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 349
WHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITP
Sbjct: 257 WHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITP 313
Query: 348 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 169
MGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GH
Sbjct: 314 MGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGH 373
Query: 168 GRFQTPADKAAFMGTLKKDRIRE 100
GRFQT A+K AFMG LK+D + E
Sbjct: 374 GRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 245 bits (600), Expect = 2e-65
Identities = 123/203 (60%), Positives = 148/203 (72%)
Frame = -2
Query: 708 REHLENPIPVDXVXCPR*ND*LHWCHQGQRDTKVSXXVGTQRXYPRKTHKGLRKVACIGA 529
REHLE + VD V +G V+ T++ PRKTHKGLRKVACIGA
Sbjct: 198 REHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-PRKTHKGLRKVACIGA 256
Query: 528 WHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 349
WHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITP
Sbjct: 257 WHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITP 313
Query: 348 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 169
MGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GH
Sbjct: 314 MGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGH 373
Query: 168 GRFQTPADKAAFMGTLKKDRIRE 100
GRFQT A+K AFMG LK+D + E
Sbjct: 374 GRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 245 bits (600), Expect = 2e-65
Identities = 123/203 (60%), Positives = 148/203 (72%)
Frame = -2
Query: 708 REHLENPIPVDXVXCPR*ND*LHWCHQGQRDTKVSXXVGTQRXYPRKTHKGLRKVACIGA 529
REHLE + VD V +G V+ T++ PRKTHKGLRKVACIGA
Sbjct: 100 REHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-PRKTHKGLRKVACIGA 158
Query: 528 WHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 349
WHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITP
Sbjct: 159 WHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITP 215
Query: 348 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 169
MGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GH
Sbjct: 216 MGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGH 275
Query: 168 GRFQTPADKAAFMGTLKKDRIRE 100
GRFQT A+K AFMG LK+D + E
Sbjct: 276 GRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 245 bits (600), Expect = 2e-65
Identities = 123/203 (60%), Positives = 148/203 (72%)
Frame = -2
Query: 708 REHLENPIPVDXVXCPR*ND*LHWCHQGQRDTKVSXXVGTQRXYPRKTHKGLRKVACIGA 529
REHLE + VD V +G V+ T++ PRKTHKGLRKVACIGA
Sbjct: 198 REHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-PRKTHKGLRKVACIGA 256
Query: 528 WHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 349
WHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITP
Sbjct: 257 WHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITP 313
Query: 348 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 169
MGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GH
Sbjct: 314 MGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGH 373
Query: 168 GRFQTPADKAAFMGTLKKDRIRE 100
GRFQT A+K AFMG LK+D + E
Sbjct: 374 GRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 245 bits (600), Expect = 2e-65
Identities = 123/203 (60%), Positives = 148/203 (72%)
Frame = -2
Query: 708 REHLENPIPVDXVXCPR*ND*LHWCHQGQRDTKVSXXVGTQRXYPRKTHKGLRKVACIGA 529
REHLE + VD V +G V+ T++ PRKTHKGLRKVACIGA
Sbjct: 100 REHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-PRKTHKGLRKVACIGA 158
Query: 528 WHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 349
WHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITP
Sbjct: 159 WHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITP 215
Query: 348 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 169
MGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GH
Sbjct: 216 MGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGH 275
Query: 168 GRFQTPADKAAFMGTLKKDRIRE 100
GRFQT A+K AFMG LK+D + E
Sbjct: 276 GRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 245 bits (600), Expect = 2e-65
Identities = 123/203 (60%), Positives = 148/203 (72%)
Frame = -2
Query: 708 REHLENPIPVDXVXCPR*ND*LHWCHQGQRDTKVSXXVGTQRXYPRKTHKGLRKVACIGA 529
REHLE + VD V +G V+ T++ PRKTHKGLRKVACIGA
Sbjct: 198 REHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL-PRKTHKGLRKVACIGA 256
Query: 528 WHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 349
WHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITP
Sbjct: 257 WHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITP 313
Query: 348 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 169
MGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GH
Sbjct: 314 MGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGH 373
Query: 168 GRFQTPADKAAFMGTLKKDRIRE 100
GRFQT A+K AFMG LK+D + E
Sbjct: 374 GRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 242 bits (592), Expect = 2e-64
Identities = 112/159 (70%), Positives = 132/159 (83%)
Frame = -2
Query: 576 PRKTHKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 397
PRKTHKGLRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK--- 249
Query: 396 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 217
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 250 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAH 309
Query: 216 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 100
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 310 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 628 RXKGYKGVXXRWHTKKXP 575
R G+KGV RWHTKK P
Sbjct: 176 RGHGFKGVTSRWHTKKLP 193
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 242 bits (592), Expect = 2e-64
Identities = 112/159 (70%), Positives = 132/159 (83%)
Frame = -2
Query: 576 PRKTHKGLRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 397
PRKTHKGLRKVACIGAWHP RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK--- 249
Query: 396 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 217
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 250 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAH 309
Query: 216 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 100
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 310 EKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 628 RXKGYKGVXXRWHTKKXP 575
R G+KGV RWHTKK P
Sbjct: 176 RGHGFKGVTSRWHTKKLP 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,340,859
Number of Sequences: 27780
Number of extensions: 346254
Number of successful extensions: 845
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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