Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_N04
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0814 - 31970558-31971126,31971242-31971413                       33   0.19 
12_01_0302 - 2286171-2286341,2286747-2286968                           29   4.1  
11_01_0404 + 3071412-3071464,3073572-3074970                           29   5.4  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   5.4  
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    29   5.4  
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256...    28   7.1  
12_02_1174 - 26696869-26698191                                         28   9.4  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   9.4  

>02_05_0814 - 31970558-31971126,31971242-31971413
          Length = 246

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -2

Query: 735 GFCPXASSHPSPXIXGTSTPIIKSPIPXTNHPQT*HPFPSIP 610
           G  P + S P+P     STP   +P P T  P T  P+PS P
Sbjct: 141 GSTPSSPSSPTPTTPNPSTPTPTTPYPSTPMPTT--PYPSTP 180


>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 83  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 184
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>11_01_0404 + 3071412-3071464,3073572-3074970
          Length = 483

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
 Frame = -3

Query: 689 VHQPRSSNPRFXTPTTP-RLNIHFHQ--SPDAVXEGVRAGXKSXRCHQRLHQRISPPRH 522
           +H P S N  F  P  P    I   +   PD + +GV+ G      H   H R     H
Sbjct: 76  MHPPNSGNQGFNQPQIPGNFTIPMDRVTEPDNISDGVQLGQHGKIAHHHHHHRHHSKNH 134


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 75  FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 221
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
            30560292-30560346,30560537-30560613,30561228-30561315,
            30561490-30561593,30562050-30562231,30562347-30563109,
            30563195-30563438,30564513-30564658,30565158-30565283,
            30565404-30565517,30565595-30565762,30566283-30566528,
            30566605-30566767,30566970-30567064,30567274-30567357,
            30567769-30568055,30568359-30568572,30568923-30569140,
            30569386-30569623,30570312-30571118,30571202-30571301,
            30571694-30571737,30571824-30571973
          Length = 1942

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -3

Query: 242  PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 63
            P F T+LY     ++KD      S+     L S+  Y  L+DP   S D+    + +   
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407

Query: 62   ILHSF 48
            +LHSF
Sbjct: 1408 LLHSF 1412


>05_06_0026 -
           25024807-25025300,25025432-25025495,25025567-25025662,
           25025719-25025929,25026616-25026690,25026820-25027037
          Length = 385

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 727 PLXIKPPFPXDXGYINPDHQIPDSXHQPPP-DLTSISINPLTP 602
           P+ +KPP P       P  Q+P     PPP    + ++ PL P
Sbjct: 5   PISVKPPSPVAAAPPPPPVQVPVPPPPPPPLPPAAAAVEPLPP 47


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 727 PLXIKPPFPXDXGYINPDHQIPDSXHQPPPDL 632
           P+   PP P     + P H+ P    QPPP L
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSL 152


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 443 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 354
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,557,338
Number of Sequences: 37544
Number of extensions: 439924
Number of successful extensions: 1137
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)