Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_N04
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    31   2.3  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    31   2.3  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    31   2.3  

>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 20/87 (22%), Positives = 32/87 (36%)
 Frame = -2

Query: 708  PSPXIXGTSTPIIKSPIPXTNHPQT*HPFPSIPXXXXXXXXXRG*KXPLSSEAPSAYLTP 529
            PSP    T TP +   +P    P    P P+IP         +    P  + A + Y TP
Sbjct: 919  PSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQ--TLPPPTSAINVYTTP 976

Query: 528  SSLGMXKGVSPPYFQVNDESQASRLIS 448
                      P   + ++E + +  +S
Sbjct: 977  DGPPTASQTKPSVTESSEEVEGTNTVS 1003


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 20/87 (22%), Positives = 32/87 (36%)
 Frame = -2

Query: 708  PSPXIXGTSTPIIKSPIPXTNHPQT*HPFPSIPXXXXXXXXXRG*KXPLSSEAPSAYLTP 529
            PSP    T TP +   +P    P    P P+IP         +    P  + A + Y TP
Sbjct: 908  PSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQ--TLPPPTSAINVYTTP 965

Query: 528  SSLGMXKGVSPPYFQVNDESQASRLIS 448
                      P   + ++E + +  +S
Sbjct: 966  DGPPTASQTKPSVTESSEEVEGTNTVS 992


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 20/87 (22%), Positives = 32/87 (36%)
 Frame = -2

Query: 708 PSPXIXGTSTPIIKSPIPXTNHPQT*HPFPSIPXXXXXXXXXRG*KXPLSSEAPSAYLTP 529
           PSP    T TP +   +P    P    P P+IP         +    P  + A + Y TP
Sbjct: 712 PSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQ--TLPPPTSAINVYTTP 769

Query: 528 SSLGMXKGVSPPYFQVNDESQASRLIS 448
                     P   + ++E + +  +S
Sbjct: 770 DGPPTASQTKPSVTESSEEVEGTNTVS 796


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,067,321
Number of Sequences: 53049
Number of extensions: 697113
Number of successful extensions: 2036
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)