Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_N01
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 236 1e-62
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 236 1e-62
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 236 1e-62
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 236 1e-62
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 236 1e-62
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 236 1e-62
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 236 1e-62
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 236 1e-62
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 284 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 341 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 717 WXREHLGNXSLXXXXFAQDEMIXCIGVTKGKGYQ 616
W REHL FAQDEMI IGVT+G G++
Sbjct: 196 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 284 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 341 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 717 WXREHLGNXSLXXXXFAQDEMIXCIGVTKGKGYQ 616
W REHL FAQDEMI IGVT+G G++
Sbjct: 196 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 126 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 185
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 186 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 242
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 243 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 717 WXREHLGNXSLXXXXFAQDEMIXCIGVTKGKGYQ 616
W REHL FAQDEMI IGVT+G G++
Sbjct: 98 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 131
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 284 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 341 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 717 WXREHLGNXSLXXXXFAQDEMIXCIGVTKGKGYQ 616
W REHL FAQDEMI IGVT+G G++
Sbjct: 196 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 126 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 185
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 186 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 242
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 243 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 717 WXREHLGNXSLXXXXFAQDEMIXCIGVTKGKGYQ 616
W REHL FAQDEMI IGVT+G G++
Sbjct: 98 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 131
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 236 bits (578), Expect = 1e-62
Identities = 112/176 (63%), Positives = 135/176 (76%)
Frame = -1
Query: 632 RAKDTKGVTXXWHTKEXTP*DTQGX*EVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKK 453
R KGVT WHTK+ +G +VACIGAWHP RV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 284 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 341 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -3
Query: 717 WXREHLGNXSLXXXXFAQDEMIXCIGVTKGKGYQ 616
W REHL FAQDEMI IGVT+G G++
Sbjct: 196 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,535
Number of Sequences: 27780
Number of extensions: 327444
Number of successful extensions: 755
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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