Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_M24
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   155   6e-38
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   155   6e-38
X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   154   1e-37

>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  155 bits (376), Expect = 6e-38
 Identities = 80/156 (51%), Positives = 97/156 (62%)
 Frame = -3

Query: 692 PGGGFXNVXKLNXLKXXPGGYFGRXVIWTQSAFGRLDPLFGSWKTPSEQKKNFNLPQPKM 513
           PG    NV KLN LK  PGG+ GR VIWT+SAF RL+ LFG+WK PS  KK +NLPQPKM
Sbjct: 228 PGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKM 287

Query: 512 ANTDLTRXXKXDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYXXXXXXXXXXXXX 333
           ANTDL+R  K +EIRKVLR P KRV R+ R+LNPLTN + ++KLNPY             
Sbjct: 288 ANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAE 347

Query: 332 XXXXXXXXADAEKSGLKLSKRNPAMKAEKLRERRRK 225
                   A A+K  ++L+K + A  A K    R K
Sbjct: 348 KRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  155 bits (376), Expect = 6e-38
 Identities = 80/156 (51%), Positives = 97/156 (62%)
 Frame = -3

Query: 692 PGGGFXNVXKLNXLKXXPGGYFGRXVIWTQSAFGRLDPLFGSWKTPSEQKKNFNLPQPKM 513
           PG    NV KLN LK  PGG+ GR VIWT+SAF RL+ LFG+WK PS  KK +NLPQPKM
Sbjct: 228 PGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKM 287

Query: 512 ANTDLTRXXKXDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYXXXXXXXXXXXXX 333
           ANTDL+R  K +EIRKVLR P KRV R+ R+LNPLTN + ++KLNPY             
Sbjct: 288 ANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAE 347

Query: 332 XXXXXXXXADAEKSGLKLSKRNPAMKAEKLRERRRK 225
                   A A+K  ++L+K + A  A K    R K
Sbjct: 348 KRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383


>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  154 bits (374), Expect = 1e-37
 Identities = 79/151 (52%), Positives = 96/151 (63%)
 Frame = -3

Query: 692 PGGGFXNVXKLNXLKXXPGGYFGRXVIWTQSAFGRLDPLFGSWKTPSEQKKNFNLPQPKM 513
           PG    NV KLN LK  PGG+ GR VIWT+SAF RL+ LFG+WK PS  KK +NLPQPKM
Sbjct: 228 PGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKM 287

Query: 512 ANTDLTRXXKXDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYXXXXXXXXXXXXX 333
           ANTDL+R  K +EIRKVLR P KRV R+ R+LNPLTN + ++KLNPY             
Sbjct: 288 ANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAE 347

Query: 332 XXXXXXXXADAEKSGLKLSKRNPAMKAEKLR 240
                   A A+K  ++L+K + A  A K R
Sbjct: 348 KRTVAKVLAKAKKQNVELAKSHFANVATKAR 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,658,458
Number of Sequences: 53049
Number of extensions: 452902
Number of successful extensions: 990
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)