BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_M22
(819 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 35 0.12
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 35 0.12
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 35 0.12
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein. 33 0.62
BT003637-1|AAO39641.1| 525|Drosophila melanogaster AT18606p pro... 31 1.9
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 31 1.9
AE014134-1160|AAF52434.2| 492|Drosophila melanogaster CG11322-P... 31 1.9
AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA... 31 2.5
BT025960-1|ABG02204.1| 433|Drosophila melanogaster IP16063p pro... 30 3.3
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB... 30 3.3
AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC... 30 3.3
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA... 30 3.3
BT029146-1|ABJ17080.1| 391|Drosophila melanogaster RT01026p pro... 29 7.6
AF363232-1|AAK77133.1| 266|Drosophila melanogaster intermediate... 29 7.6
AE014296-2457|AAS65004.1| 391|Drosophila melanogaster CG11551-P... 29 7.6
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 223 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVP-EYPAGPEPAC 396
G+ Y+ + + +P R S + L R PSRYGSP P P E PAG + C
Sbjct: 44 GRGYDNGSGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 223 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVP-EYPAGPEPAC 396
G+ Y+ + + +P R S + L R PSRYGSP P P E PAG + C
Sbjct: 44 GRGYDNGSGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 223 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVP-EYPAGPEPAC 396
G+ Y+ + + +P R S + L R PSRYGSP P P E PAG + C
Sbjct: 44 GRGYDNGSGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
Length = 2715
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 256 PRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPA 393
P TP+ S G ++++Q + P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 87
>BT003637-1|AAO39641.1| 525|Drosophila melanogaster AT18606p
protein.
Length = 525
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 178 SDVGCKSAGESFSGWVLKSLGPRSALNTCRSLSLTYPARPF 56
S V C F G+V +SL P +LN C L+LTY F
Sbjct: 277 SSVPCLERHPKFYGFV-RSLSPSISLNMCHPLALTYRQNNF 316
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 310 QPSRYGSPSGRPDSAAGVPE-YPAGPEPACRVGT 408
QP Y P+ RP P YP P+P C+ T
Sbjct: 1411 QPKTYSPPTSRPLITTSKPRCYPGSPDPECQPAT 1444
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 310 QPSRY-GSPSGRPDSAAGVPEYPAGPEPACRVGTRYT 417
+P+ Y GS R A G YP P+P+C+ TR T
Sbjct: 557 KPNCYPGSTDTRCPQAPGPRCYPGSPDPSCQPPTRIT 593
>AE014134-1160|AAF52434.2| 492|Drosophila melanogaster CG11322-PA
protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 178 SDVGCKSAGESFSGWVLKSLGPRSALNTCRSLSLTYPARPF 56
S V C F G+V +SL P +LN C L+LTY F
Sbjct: 244 SSVPCLERHPKFYGFV-RSLSPSISLNMCHPLALTYRQNNF 283
>AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA
protein.
Length = 588
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 180 PL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 290
PL +N EV PR++L+P +A P A+P P RR
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387
>BT025960-1|ABG02204.1| 433|Drosophila melanogaster IP16063p
protein.
Length = 433
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 393
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
isoform B protein.
Length = 2716
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 393
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC,
isoform C protein.
Length = 2556
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 393
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
isoform A protein.
Length = 2703
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 393
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>BT029146-1|ABJ17080.1| 391|Drosophila melanogaster RT01026p
protein.
Length = 391
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 277 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 408
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 80 SLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 129
>AF363232-1|AAK77133.1| 266|Drosophila melanogaster intermediate
neuroblasts defective protein.
Length = 266
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 277 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 408
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 1 SLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 50
>AE014296-2457|AAS65004.1| 391|Drosophila melanogaster CG11551-PA
protein.
Length = 391
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 277 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 408
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 80 SLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,862,381
Number of Sequences: 53049
Number of extensions: 556420
Number of successful extensions: 2637
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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