Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_M16
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0189 + 1578935-1578950,1579227-1579390,1579493-1579605,157... 134 7e-32
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 30 2.4
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 29 4.1
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 29 5.5
12_01_0030 + 262452-263210,263332-263575,263867-264165 28 7.2
06_01_0263 + 1936927-1936936,1937031-1937305,1937727-1938079,193... 28 7.2
10_01_0197 + 2148109-2149551 28 9.6
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 28 9.6
05_06_0174 - 26149663-26149885,26150353-26151701 28 9.6
>08_01_0189 +
1578935-1578950,1579227-1579390,1579493-1579605,
1579850-1580399,1580514-1580813,1581093-1581133,
1581359-1581606,1581983-1582086,1582177-1582323
Length = 560
Score = 134 bits (324), Expect = 7e-32
Identities = 70/176 (39%), Positives = 95/176 (53%), Gaps = 24/176 (13%)
Frame = -2
Query: 658 YGGENSVRVFGDTAQHAAGQLXAWEARAHGLDLHXLAEPTKLQMLQAHYKRDQQRYKSQV 479
Y G+N R+ G + + AWEA G D+H A P++ ++L +K +++ KS+
Sbjct: 280 YVGDNQNRLSGQALEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFKSFKIKKEKLKSEN 339
Query: 478 KQSILEKYGGEEHLQSVPRELLLAQTEVFTRYNRDGTLVSGA------------------ 353
K I+EKYG + +PRELLL Q+E Y+R G ++ G
Sbjct: 340 KDKIMEKYGNAASEEPIPRELLLGQSEKEIEYDRTGRIIKGQLTSSISHQMTRSLSSWIL 399
Query: 352 ------EKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHSFIKMSYCVGEAG 203
+ L KSKYEED INNHTTVWGS+W+D QWGYKCC I+ SYC G AG
Sbjct: 400 KVHFIQDVALPKSKYEEDVFINNHTTVWGSWWKDHQWGYKCCKQTIRNSYCTGLAG 455
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 514 YKRDQQRY-KSQVKQSILEKYGGEEHLQSVPRELLLAQTEVFTRYNRDGTLV 362
YK D +R K K+++ E+YGGEE L + A + FT+Y+ LV
Sbjct: 448 YKFDDERVTKEDTKKALEEQYGGEEELPQINPGFNNAPFK-FTKYSNAYMLV 498
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 514 YKRDQQRY-KSQVKQSILEKYGGEEHLQSV 428
YK D +R K K+++ E+YGGEE L +
Sbjct: 434 YKFDDERVTKEDTKKALEEQYGGEEELPQI 463
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -2
Query: 514 YKRDQQRY-KSQVKQSILEKYGGEEHL 437
YK D +R K +K+++ E+YGGEE L
Sbjct: 413 YKFDDERVTKEDMKRALEEQYGGEEEL 439
>12_01_0030 + 262452-263210,263332-263575,263867-264165
Length = 433
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 543 GSANXCRSRP-CARASHANSCPAACCAVSPKTRTLFSPPYXT 665
G N S+P C+ + N+C C+ + RT+ PP T
Sbjct: 313 GRFNKSNSKPICSPVQNYNACFGRLCSFCDEPRTILHPPCAT 354
>06_01_0263 + 1936927-1936936,1937031-1937305,1937727-1938079,
1938598-1938715,1938823-1938946,1939389-1939608,
1939948-1940017,1940083-1940136,1940536-1940604,
1941138-1941194,1941503-1941575,1942037-1942080,
1942629-1942751,1943092-1943321,1943552-1943660,
1944196-1944339,1944443-1944604,1944921-1945197,
1945326-1945486,1945591-1945782,1946789-1946971,
1946986-1947063,1947187-1947366,1947476-1947562
Length = 1130
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 485 AGETIDSGKVWR*GAPPVRTQGAAAGPDRSVHPLQQ 378
+G + S K+WR +PPVRT+ G D+ +Q+
Sbjct: 1080 SGASFVSLKLWR-SSPPVRTEQQKGGVDKGTRYMQE 1114
>10_01_0197 + 2148109-2149551
Length = 480
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 528 ICSLVGSANXCRSRPCARASHANSCPAACCAVSP 629
+ ++ ++ C+SRP + S AN+ A C V+P
Sbjct: 78 VLDIIKNSILCKSRPEEQVSSANTISAPTCYVNP 111
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -2
Query: 574 HGLDLHXLAEPTKLQMLQAHYKRDQQRY-KSQVKQSILEKYGGEEHLQSVPRELLLAQTE 398
HG + PT + +K D +R K K+++ E+YGGEE L L +
Sbjct: 507 HGGHYYAFIRPT---LSDQWFKFDDERVTKEDAKRALEEQYGGEEELPQTNPGLNNTPFK 563
Query: 397 VFTRYNRDGTLV 362
FT+Y+ LV
Sbjct: 564 -FTKYSNAYMLV 574
>05_06_0174 - 26149663-26149885,26150353-26151701
Length = 523
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 477 NNRFWKSMEVRSTSSPYPGSCCWPRPKCSPATTGTAR 367
++R W+S+ SP+PG C P P ++ AR
Sbjct: 42 SDREWRSVGPDPCGSPWPGLECKPVPAAGNVSSAAAR 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,888
Number of Sequences: 37544
Number of extensions: 362358
Number of successful extensions: 1196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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