Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_M16
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 167 6e-42
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.2
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 30 2.1
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 8.6
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 8.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 167 bits (407), Expect = 6e-42
Identities = 73/172 (42%), Positives = 110/172 (63%)
Frame = -2
Query: 658 YGGENSVRVFGDTAQHAAGQLXAWEARAHGLDLHXLAEPTKLQMLQAHYKRDQQRYKSQV 479
+ G+N VR G+ Q+ AW+A G+ H +AEPTKL+ L+ Y++++ K++
Sbjct: 285 FSGDNFVRYSGEVTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNET 344
Query: 478 KQSILEKYGGEEHLQSVPRELLLAQTEVFTRYNRDGTLVSGAEKQLAKSKYEEDALINNH 299
++ +L+KYGG EH++ ELLLAQTE + YNR G ++ G EK S+++ED NH
Sbjct: 345 QKELLDKYGGGEHMERPADELLLAQTESYIEYNRKGKVIKGKEKVAISSRFKEDIYPQNH 404
Query: 298 TTVWGSYWRDGQWGYKCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTDGI 143
T+V+GS+WR+G+WGYKCCH F+K SYC G+ G + S K +TS + I
Sbjct: 405 TSVFGSFWREGRWGYKCCHQFVKNSYCTGKQG--IEAETSAAKGTTTSNEEI 454
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 516 CACSICSLVGSANXCRSRPCARASHANSCPAACCAVSPKTRTLFSPPY 659
C CS C L + + C S C S P ACC P + P +
Sbjct: 42 CGCSGCDLFPNRSCCSSSCC---SSQKPIPLACCPPPPPPKPCCQPAF 86
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = -2
Query: 559 HXLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPREL 416
H +++ L+AHY+R Q+ + V+Q +E G + ++ + +++
Sbjct: 687 HTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQM 734
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 253 KCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTD 149
+CC+S ++ C+ E ++V +S KKL S D
Sbjct: 47 ECCNSTLRKEKCIAEFVESVKTVISKAKKLRLSRD 81
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 544 PTKLQMLQAHYKRDQQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRYNRDGT 368
P +Q++ A D + S V+Q L + + LQS+P + + E +RY++ T
Sbjct: 876 PNVIQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRYSKQNT 935
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 544 PTKLQMLQAHYKRDQQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRYNRDGT 368
P +Q++ A D + S V+Q L + + LQS+P + + E +RY++ T
Sbjct: 876 PNVIQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRYSKQNT 935
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 444 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 346
S++SP P S P P SPA+TG+ + +G S
Sbjct: 318 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 348
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 444 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 346
S++SP P S P P SPA+TG+ + +G S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 444 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 346
S++SP P S P P SPA+TG+ + +G S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,619,115
Number of Sequences: 27780
Number of extensions: 274032
Number of successful extensions: 960
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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