Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_M14
         (824 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini...    30   8.8  
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini...    30   8.8  
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini...    30   8.8  
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini...    30   8.8  
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr...    30   8.8  
AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.     30   8.8  

>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1147

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -1

Query: 341  GQPPXXSGXLFPTFFXRXGPQSNTGVVVRPERLLGAXGPRAGP 213
            G PP   G   P      GP    G  VRP  + G  GP  GP
Sbjct: 889  GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 931


>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1147

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -1

Query: 341  GQPPXXSGXLFPTFFXRXGPQSNTGVVVRPERLLGAXGPRAGP 213
            G PP   G   P      GP    G  VRP  + G  GP  GP
Sbjct: 889  GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 931


>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1146

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -1

Query: 341  GQPPXXSGXLFPTFFXRXGPQSNTGVVVRPERLLGAXGPRAGP 213
            G PP   G   P      GP    G  VRP  + G  GP  GP
Sbjct: 889  GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 931


>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1147

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -1

Query: 341  GQPPXXSGXLFPTFFXRXGPQSNTGVVVRPERLLGAXGPRAGP 213
            G PP   G   P      GP    G  VRP  + G  GP  GP
Sbjct: 889  GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 931


>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR protein
            rA4 protein.
          Length = 1157

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -1

Query: 341  GQPPXXSGXLFPTFFXRXGPQSNTGVVVRPERLLGAXGPRAGP 213
            G PP   G   P      GP    G  VRP  + G  GP  GP
Sbjct: 899  GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 941


>AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -1

Query: 341 GQPPXXSGXLFPTFFXRXGPQSNTGVVVRPERLLGAXGPRAGP 213
           G PP   G   P      GP    G  VRP  + G  GP  GP
Sbjct: 671 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 713


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,218,753
Number of Sequences: 237096
Number of extensions: 1608563
Number of successful extensions: 2229
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2214
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)