Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_M06
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 26 2.7
07_01_0080 + 587674-588510 29 2.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.7
08_02_0309 - 15622877-15623710 29 4.9
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 29 4.9
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 4.9
05_04_0011 + 17139322-17139451,17139552-17140174 25 6.1
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 28 6.5
02_05_0142 - 26227792-26228346,26228486-26228608,26229824-262300... 28 6.5
12_02_1174 - 26696869-26698191 28 8.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 8.6
07_01_0662 + 4972953-4973645,4973758-4974046,4974790-4974803,497... 28 8.6
06_03_0729 + 23927656-23927661,23927774-23927923,23928316-239285... 28 8.6
03_01_0515 - 3864796-3865425 28 8.6
02_03_0120 + 15463163-15465250 28 8.6
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 606 PPPPSPXXPPXGS 644
PPPP P PP GS
Sbjct: 85 PPPPPPQKPPQGS 97
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +3
Query: 570 PXSXPPXXXXXXPPPPSPXXP 632
P PP PPP P P
Sbjct: 57 PPPPPPQPAKEPPPPTKPKHP 77
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPP 635
P P P S P PPPP P PP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 278 PGGXGXPXFKKGXKXPPPXRGXXAPPP 358
P G P KG PPP +G PPP
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/47 (27%), Positives = 15/47 (31%)
Frame = +3
Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPPXGSXXAXXXXPXXXXTP 686
P P P PP PPPP PP + P +P
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 278 PGGXGXPXFKKGXKXPPPXRGXXAPPPXXXXXXXKXXXSXXXXXXPPP 421
P P KG PPP +G PPP PPP
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>08_02_0309 - 15622877-15623710
Length = 277
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 582 PPXXXXXXPPPPSPXXPPXGSXXA 653
PP PPPP P PP G A
Sbjct: 72 PPPSATTAPPPPPPRAPPGGEGCA 95
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 582 PPXXXXXXPPPPSPXXPPXGSXXA 653
PP PPPP P PP G A
Sbjct: 97 PPPPPELPPPPPPPPLPPHGDVEA 120
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPP 635
P P PP PPPP P PP
Sbjct: 349 PKLMPPPPPPPPPPPPPPPPPPPRPPP 375
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 25.0 bits (52), Expect(2) = 6.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 606 PPPPSPXXPPXGS 644
PPPP P PP G+
Sbjct: 172 PPPPPPPSPPNGA 184
Score = 21.8 bits (44), Expect(2) = 6.1
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 570 PXSXPPXXXXXXPPPPSP 623
P P PPPPSP
Sbjct: 127 PTGPDPVHNKFQPPPPSP 144
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPPXG 641
P P P PP PPPP P PP G
Sbjct: 47 PPPPQPTLPP--PPPRTLPPPPPPPPPQPPVG 76
>02_05_0142 -
26227792-26228346,26228486-26228608,26229824-26230084,
26230658-26231116
Length = 465
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 305 KKGXKXPPPXRGXXAPPP 358
+KG K PPP G PPP
Sbjct: 14 RKGKKRPPPHEGPAPPPP 31
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 582 PPXXXXXXPPPPSPXXPP 635
PP PPPPSP PP
Sbjct: 288 PPEPTKPKPPPPSPPPPP 305
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPPPSPXXPPXGSXXAXXXXPXXXXTP 686
PPPP P PP G+ A P P
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPP 571
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXP 632
P P P PP PPPP P P
Sbjct: 1161 PPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
>07_01_0662 +
4972953-4973645,4973758-4974046,4974790-4974803,
4974848-4974856
Length = 334
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPPXG 641
P P P S P PPPP PP G
Sbjct: 185 PASPPRHRPASPPSYLARPPPPPPGYIEPPQG 216
>06_03_0729 +
23927656-23927661,23927774-23927923,23928316-23928567,
23929072-23929209,23931213-23932730
Length = 687
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 582 PPXXXXXXPPPPSPXXPP 635
PP PPPPSP PP
Sbjct: 202 PPSSDAPSPPPPSPPPPP 219
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXP 632
P P PP PPPPSP P
Sbjct: 84 PPPPLPPPPPPPAASPPPPPPSPPPP 109
>02_03_0120 + 15463163-15465250
Length = 695
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 582 PPXXXXXXPPPPSPXXPP 635
PP PPPPSP PP
Sbjct: 302 PPPSPSPSPPPPSPPPPP 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,768,185
Number of Sequences: 37544
Number of extensions: 178482
Number of successful extensions: 1967
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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