Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_M06
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ854815-1|ABI75145.1|  112|Homo sapiens hyperpolarization-activ...    32   1.8  
AJ133727-1|CAB42630.1|  889|Homo sapiens hyperpolarization-activ...    32   1.8  
AJ012582-1|CAB42602.1|  889|Homo sapiens hyperpolarization-activ...    32   1.8  
AF065164-1|AAC28444.2|  889|Homo sapiens hyperpolarization-activ...    32   1.8  
AC005559-2|AAC33280.2|  528|Homo sapiens hyperpolarization activ...    32   1.8  
BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        31   5.5  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     31   5.5  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    31   5.5  

>DQ854815-1|ABI75145.1|  112|Homo sapiens
           hyperpolarization-activated cyclic nucleotide-gated
           potassium channel 2 protein.
          Length = 112

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXGSXXAXXXXP 668
           P    P   PP      PPPP P  PP G   A    P
Sbjct: 18  PAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55


>AJ133727-1|CAB42630.1|  889|Homo sapiens
           hyperpolarization-activated cyclic nucleotide-gated
           channel hHCN2 protein.
          Length = 889

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXGSXXAXXXXP 668
           P    P   PP      PPPP P  PP G   A    P
Sbjct: 18  PAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55


>AJ012582-1|CAB42602.1|  889|Homo sapiens
           hyperpolarization-activated cation channel HCN2 protein.
          Length = 889

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXGSXXAXXXXP 668
           P    P   PP      PPPP P  PP G   A    P
Sbjct: 18  PAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55


>AF065164-1|AAC28444.2|  889|Homo sapiens
           hyperpolarization-activated, cyclic nucleotide-gated
           channel 2 protein.
          Length = 889

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXGSXXAXXXXP 668
           P    P   PP      PPPP P  PP G   A    P
Sbjct: 18  PTTGPPPPPPPRPPKQQPPPPPPPAPPPGPGPAPPQHP 55


>AC005559-2|AAC33280.2|  528|Homo sapiens hyperpolarization
           activated cyclic nucleotide-gated potassium channel 2
           protein.
          Length = 528

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXGSXXAXXXXP 668
           P    P   PP      PPPP P  PP G   A    P
Sbjct: 18  PAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55


>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPP 635
           P  P    P   PP      PPPP P  PP
Sbjct: 148 PPLPGSPEPPPAPPLPGDLPPPPPPPPPPP 177



 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXG 641
           P    P   PP      PPPP P  PP G
Sbjct: 167 PPPPPPPPPPPGTDGPVPPPPPPPPPPPG 195


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPP 635
           P  P    P   PP      PPPP P  PP
Sbjct: 566 PPLPGSPEPPPAPPLPGDLPPPPPPPPPPP 595



 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXG 641
           P    P   PP      PPPP P  PP G
Sbjct: 585 PPPPPPPPPPPGTDGPVPPPPPPPPPPPG 613


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 546 PXXPXXXXPXSXPPXXXXXXPPPPSPXXPP 635
           P  P    P   PP      PPPP P  PP
Sbjct: 457 PPLPGSPEPPPAPPLPGDLPPPPPPPPPPP 486



 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 555 PXXXXPXSXPPXXXXXXPPPPSPXXPPXG 641
           P    P   PP      PPPP P  PP G
Sbjct: 476 PPPPPPPPPPPGTDGPVPPPPPPPPPPPG 504


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,832,451
Number of Sequences: 237096
Number of extensions: 1062365
Number of successful extensions: 7930
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6416
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)