Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_M04
         (777 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   143   1e-34
AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical...    30   2.1  
Z81070-12|CAB03008.1|  495|Caenorhabditis elegans Hypothetical p...    29   4.9  
Z75544-6|CAA99882.1|  495|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AF174643-1|AAD51977.1|  495|Caenorhabditis elegans PP2A-B regula...    29   4.9  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  143 bits (347), Expect = 1e-34
 Identities = 82/191 (42%), Positives = 105/191 (54%)
 Frame = -2

Query: 695 NTGLGSRENLFFPGSFYPYQDFKGYY*NHQRCTHS*SPVNKVGASEATLLNMLNISPFSY 516
           NTG+G  +  FF     P +  +G         H     +KVGASE+ LLNML ++PFSY
Sbjct: 127 NTGMGPEKTSFFQALQIPTKIARGTI-EILNDVHLIKEGDKVGASESALLNMLGVTPFSY 185

Query: 515 GLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGF 336
           GLVV+QVYD GT++ PE+LD+  E+LR +F +GV NVA++SLA+ YPT+AS  HS+ANG 
Sbjct: 186 GLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGL 245

Query: 335 KNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
           +N+L               IK FI DPSKF                              
Sbjct: 246 QNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPAAAAPAAKKEEPKEE 301

Query: 155 SDDDMGFGLFD 123
           SDDDMGFGLFD
Sbjct: 302 SDDDMGFGLFD 312



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = -3

Query: 700 PTTPALVPEKTXFFQALFIXTKISKGTIEIINDVHILE 587
           P    + PEKT FFQAL I TKI++GTIEI+NDVH+++
Sbjct: 125 PQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIK 162


>AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical
           protein Y56A3A.22 protein.
          Length = 263

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/79 (24%), Positives = 34/79 (43%)
 Frame = -3

Query: 691 PALVPEKTXFFQALFIXTKISKGTIEIINDVHILEAR*TRLELLKPPFSTC*TSLHSHMV 512
           PA     T +F AL++  K     I ++  +H+ +A   +++           SL  + +
Sbjct: 97  PAHAASCTAWFIALYLVVKSGVDVISLLEWLHMPDAIVEKVKNTPETAGVVVVSLILYKI 156

Query: 511 LLLSRYMILELFLHLKFWT 455
            +  RYM   L +   FWT
Sbjct: 157 AMPFRYMTTLLLIQATFWT 175


>Z81070-12|CAB03008.1|  495|Caenorhabditis elegans Hypothetical
           protein F26E4.1 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
 Frame = +3

Query: 420 SLELGTEILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVHRASRMC 599
           SLE+  +I    ++  + KN++  I   N+KTI  W+  +   K G  + NL  R +R+ 
Sbjct: 128 SLEIDEKIN--QIRWLKKKNAANFILSTNDKTIKLWKISERERKIGDDAWNL-PRTNRIN 184

Query: 600 TS-----LMI-SIVPFEILV 641
           TS     L I SIVP E++V
Sbjct: 185 TSSFRGRLQIPSIVPMELIV 204


>Z75544-6|CAA99882.1|  495|Caenorhabditis elegans Hypothetical
           protein F26E4.1 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
 Frame = +3

Query: 420 SLELGTEILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVHRASRMC 599
           SLE+  +I    ++  + KN++  I   N+KTI  W+  +   K G  + NL  R +R+ 
Sbjct: 128 SLEIDEKIN--QIRWLKKKNAANFILSTNDKTIKLWKISERERKIGDDAWNL-PRTNRIN 184

Query: 600 TS-----LMI-SIVPFEILV 641
           TS     L I SIVP E++V
Sbjct: 185 TSSFRGRLQIPSIVPMELIV 204


>AF174643-1|AAD51977.1|  495|Caenorhabditis elegans PP2A-B
           regulatory subunit PR55/B protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
 Frame = +3

Query: 420 SLELGTEILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVHRASRMC 599
           SLE+  +I    ++  + KN++  I   N+KTI  W+  +   K G  + NL  R +R+ 
Sbjct: 128 SLEIDEKIN--QIRWLKKKNAANFILSTNDKTIKLWKISERERKIGDDAWNL-PRTNRIN 184

Query: 600 TS-----LMI-SIVPFEILV 641
           TS     L I SIVP E++V
Sbjct: 185 TSSFRGRLQIPSIVPMELIV 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,859,707
Number of Sequences: 27780
Number of extensions: 280543
Number of successful extensions: 708
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)