Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_M01
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207...    36   0.027
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696...    36   0.036
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741...    34   0.11 
03_02_0927 - 12452262-12452428,12452538-12452607,12452689-124528...    32   0.58 
03_06_0184 - 32188778-32188947,32189104-32189173,32189332-321894...    31   0.77 
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331...    31   1.0  
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219...    28   9.4  

>01_01_0255 +
           2079112-2079196,2079334-2079514,2079712-2079853,
           2079934-2080003,2080140-2080303
          Length = 213

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = -3

Query: 340 VGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELA----RAKINEITAKVRAAVPL 173
           + +CF+ +TL+ L  +   TLP  YE  +++VD  +  A    R+ + +I + V   +P 
Sbjct: 147 IASCFSSLTLLYLVVLGTMTLPVMYENYESEVDHLVSTAVHDLRSHVGDIDSGVFKKIPR 206

Query: 172 GRRA 161
           GR A
Sbjct: 207 GRGA 210


>01_01_0885 +
           6966700-6966979,6967930-6968110,6968224-6968365,
           6968448-6968517,6968617-6968783
          Length = 279

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = -3

Query: 340 VGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINE----ITAKVRAAVPL 173
           +G+C N +TL+ + ++ L T+P  YE  + Q+D+  E    +I +    + AKV + VP 
Sbjct: 212 LGSCCNFLTLVYIVFVVLHTVPILYEKYEDQIDSYGEKGWVEIKKQYAVLDAKVLSKVPR 271

Query: 172 G 170
           G
Sbjct: 272 G 272


>05_06_0144 -
           25973635-25973801,25973878-25973947,25974049-25974190,
           25974647-25974827,25975248-25975443
          Length = 251

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -3

Query: 340 VGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITA 197
           +G+C N +TL  + ++ L+T+P  YE  + Q+DA  E A  ++ +  A
Sbjct: 184 LGSCCNFLTLFYIVFMVLYTVPVLYEKYEDQIDAFGEKAMIELKKYYA 231


>03_02_0927 -
           12452262-12452428,12452538-12452607,12452689-12452830,
           12452937-12453117,12454068-12454203
          Length = 231

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 340 VGACFNGITLIILGWIALFTLPKAYEMNKAQVD 242
           +G   + ITL   G IAL T+P  Y  N+ QVD
Sbjct: 164 IGNFCSSITLAYFGTIALVTIPALYSKNQEQVD 196


>03_06_0184 -
           32188778-32188947,32189104-32189173,32189332-32189473,
           32189559-32189739,32189857-32190051,32190782-32190795,
           32190815-32190864,32191493-32191519
          Length = 282

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = -3

Query: 352 ASRNVGACFNGITLIILGWIALFTLPKAYEMNKAQVD----ANLELARAKINEITAKVRA 185
           A+  +G   N +T+I +G+++  TLP  YE  + QVD      L L R +  ++   V +
Sbjct: 210 AAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLS 269

Query: 184 AVPLG 170
            +P G
Sbjct: 270 KIPKG 274


>01_06_0631 +
           30732091-30732292,30732690-30732870,30732994-30733135,
           30733228-30733297,30733383-30733549
          Length = 253

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -3

Query: 340 VGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITA 197
           +G+  N +TL  + ++AL+T+P  YE  + +VDA  E A  +  +  A
Sbjct: 186 LGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYA 233


>06_03_0181 +
           17618888-17619125,17621503-17621683,17621765-17621906,
           17622002-17622071,17622162-17622307,17623382-17623948,
           17624558-17624641,17624723-17624797,17625049-17625217,
           17625395-17625586,17625662-17626053
          Length = 751

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -3

Query: 340 VGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAK----INEITAKVRAAVPL 173
           VG+C + +TLI +  + L T+P  Y+  + +VD     A ++       + AKV + +P 
Sbjct: 198 VGSCCDFLTLIYVAVLMLHTVPILYDKYQDKVDHFAGRAHSEACKHYEVLDAKVLSKIPR 257

Query: 172 G 170
           G
Sbjct: 258 G 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,032,568
Number of Sequences: 37544
Number of extensions: 135485
Number of successful extensions: 413
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)