Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_L18
(1053 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.2
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.8
Identities = 31/115 (26%), Positives = 31/115 (26%), Gaps = 8/115 (6%)
Frame = +2
Query: 56 PXSXAXRXPSXPLAPXTPXXXAXPAPRX--LXXPXXPKXXGXXKPGXPXFTXGAPXWGXP 229
P P P P P A P P P G P P GA P
Sbjct: 151 PCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGP 210
Query: 230 XVXAGEXXXX------PXPPRGPXXXPXXXXXRSLXAXGAAXHXXPXRPPXAXXP 376
AGE P P GP P A GAA P P A P
Sbjct: 211 DGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGP 265
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/79 (30%), Positives = 27/79 (34%)
Frame = -1
Query: 936 DXXXGXRXXGAXXGXXXXEXXXGRGXXXDXXRVGXEGXGGGXGGXGXGXXXXXGXXXXGG 757
D G G G + RG R G + GGG GG G GG
Sbjct: 168 DRRGGGSSGGGRFGGGGGDRFNDRGSRGGD-RYGGDRRGGGGGGGGD-------RYGGGG 219
Query: 756 XXRXXXXRHGXGRAXRGSP 700
R R+G G RGSP
Sbjct: 220 GDRYGGDRYGGGGGRRGSP 238
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.8
Identities = 31/115 (26%), Positives = 31/115 (26%), Gaps = 8/115 (6%)
Frame = +2
Query: 56 PXSXAXRXPSXPLAPXTPXXXAXPAPRX--LXXPXXPKXXGXXKPGXPXFTXGAPXWGXP 229
P P P P P A P P P G P P GA P
Sbjct: 150 PCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGP 209
Query: 230 XVXAGEXXXX------PXPPRGPXXXPXXXXXRSLXAXGAAXHXXPXRPPXAXXP 376
AGE P P GP P A GAA P P A P
Sbjct: 210 DGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGP 264
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -1
Query: 897 GXXXXEXXXGRGXXXDXXRVGXEGXGGGXGGXGXGXXXXXGXXXXGGXXR 748
G + GRG G G GGG GG G G G GG R
Sbjct: 230 GNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRWGWGRPSWGGWGR 279
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 4.2
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = -1
Query: 909 GAXXGXXXXEXXXGRGXXXDXXRVGXEGXGGGX-GGXGXGXXXXXGXXXXGGXXRXXXXR 733
G G GRG G GGG GG G G GG R R
Sbjct: 82 GGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGR 141
Query: 732 HGXGRAXRGSPG 697
G G RG PG
Sbjct: 142 GGDG---RGPPG 150
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -1
Query: 819 GGXGGXGXGXXXXXGXXXXGGXXRXXXXRHGX-GR--AXRGSPGXXEXXGG 676
GG GG G G GG RHG GR + GSPG GG
Sbjct: 305 GGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGG 355
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 313 PXGHXGXXSPXAXXPPXSVXPTXXXSXSAXPXPTKPGXAXXAXSLLPHP 459
P P PP S P S P P P A S PHP
Sbjct: 476 PVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPPASSARPHP 524
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 313 PXGHXGXXSPXAXXPPXSVXPTXXXSXSAXPXPTKPGXAXXAXSLLPHP 459
P P PP S P S P P P A S PHP
Sbjct: 540 PVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPPASSARPHP 588
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.137 0.471
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,903,983
Number of Sequences: 27780
Number of extensions: 153459
Number of successful extensions: 565
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2803879784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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