Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_L16
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    28   0.43 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    27   0.75 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.3  
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    24   5.3  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    24   5.3  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 532 RTSLYKKAGWYRSGIP--RALCDIHCAGADSLSLISW 428
           R+ L+K  GWY  G+    ALC + C G  S  ++ W
Sbjct: 385 RSGLFKGGGWYMLGVQSLSALC-LACWGVCSTFVLLW 420


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 27.1 bits (57), Expect = 0.75
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 749 RQWGXSCSTFWKSPVDFG-AKTNPIDVMGVEIG 844
           ++WG +C TF + P  FG  + + I  M  E+G
Sbjct: 90  KEWGTTCLTFEEDPEPFGRVRDHNISEMCKELG 122


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 247 LVPEVPVKRRLLNPQPFRQFACRQTVYADLVQQV 348
           L  E+P ++RLL+ QP  ++ C    Y +L  QV
Sbjct: 506 LAGELPGQQRLLSRQPAPEYWC-SVAYFELDTQV 538


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 443 ITDKLVDILCLSVIKCQA*QSCSRIQ*SVPPWTC*T 336
           I  K+  +LC S++   A  +C ++     P+TC T
Sbjct: 4   IVGKVFLVLCGSLLVTGAPNTCGKLDLKTDPFTCCT 39


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 443 ITDKLVDILCLSVIKCQA*QSCSRIQ*SVPPWTC*T 336
           I  K+  +LC S++   A  +C ++     P+TC T
Sbjct: 4   IVGKVFLVLCGSLLVTGAPNTCGKLDLKTDPFTCCT 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,282
Number of Sequences: 2352
Number of extensions: 20854
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)