Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_L14
         (808 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40030-2|AAR12978.2|  292|Caenorhabditis elegans Hypothetical pr...    31   0.73 
AF025460-2|AAF02169.3|  545|Caenorhabditis elegans Prion-like-(q...    30   2.2  
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z49908-3|CAA90094.2|  382|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z71185-3|CAA94905.2|  427|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical p...    28   6.8  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL132948-12|CAD31814.1|  283|Caenorhabditis elegans Hypothetical...    28   9.0  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.0  

>U40030-2|AAR12978.2|  292|Caenorhabditis elegans Hypothetical
           protein T13C2.7 protein.
          Length = 292

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
 Frame = -3

Query: 611 QSLTPNRRSSRRVKP------PLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLI 450
           +SL    RSSRR K       PL+S++  +Y   +SL +    S    QV DE++     
Sbjct: 118 RSLRSLSRSSRRSKSSMAESNPLNSDSTRSYKNENSLNVPFTTSQQAIQVEDETRTGTSS 177

Query: 449 SRH---STHTPLPSSNSPPHRRCRH 384
           +R    S  TP P   + P+R   H
Sbjct: 178 TRQSVCSAPTPHPLEVNLPNRSKSH 202


>AF025460-2|AAF02169.3|  545|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 41
           protein.
          Length = 545

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -3

Query: 560 SSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQA-SRLISRHSTHTPLPSSNSPP 402
           SS A S+  TPSS    K  SPP+ Q +    A  R ++  S H P P ++S P
Sbjct: 51  SSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVT--SAHAPPPPASSAP 102


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -3

Query: 566 PLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSP 405
           P+SS  P    TP         S PY Q+N+    +R  +R    T + + +SP
Sbjct: 493 PMSSPPPPLPRTPQPNNGLPNASLPYNQINNAGSFTRTAARRWKFTSVEARSSP 546


>Z49908-3|CAA90094.2|  382|Caenorhabditis elegans Hypothetical
           protein C07E3.3 protein.
          Length = 382

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 23/110 (20%), Positives = 40/110 (36%)
 Frame = -3

Query: 701 LPRQHLPXXGNQPDHQSRSXHHHPRLTPFHQSLTPNRRSSRRVKPPLSSEAPSAYLTPSS 522
           L R+ +P   + P++  RS     R++P  +    +     R  PP+S   P   + P+ 
Sbjct: 153 LQRREVPSKQSPPNYPKRSSVFGGRVSPLPRQSEVDPHPMPRYIPPMSPSNPIDDVPPTH 212

Query: 521 LGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPPHRRCRHGHKP 372
           +            ++DE Q  +    + T       N   HR    G  P
Sbjct: 213 VSELHAEKRMIVGIDDELQPEKNNVTYVTVATAAIDNELLHRHPEVGRHP 262


>Z71185-3|CAA94905.2|  427|Caenorhabditis elegans Hypothetical
           protein C35A5.4 protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
 Frame = -3

Query: 626 LTPFHQSLTPNRRSSRRVKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRL-- 453
           L PF ++ TP  + ++ V P  S+ +P+   TP+     K  +P    V +    S++  
Sbjct: 295 LNPFDRTPTPTTKKTQSVTPSNSTPSPAKPATPT-----KTPTPTKKPVENNETLSQVKT 349

Query: 452 ISRHSTHTP-LPSSNS 408
           +S+  +H+P  P  NS
Sbjct: 350 VSKALSHSPKSPKKNS 365


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
 Frame = -3

Query: 701 LPRQHLPXXGNQPDHQSRSXHHHPRLTPFHQSLTPNRRSSRRVKPPLSSEAPSAYLTPSS 522
           +P+Q  P   N P H     H   +   F + + P  ++  RV PP    AP     P S
Sbjct: 397 VPKQTPPPTPNAPSHS----HQVDQFAEF-KLVEP--KTPTRVAPPPPPSAPPTIKFPIS 449

Query: 521 LGMX-KGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPP 402
            G      +PP          SR+ +   +  P   S SPP
Sbjct: 450 TGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP 490


>Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical
           protein T20B3.15 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 271 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHV-SSD 95
           ++D +C F+   +  + YD I T  +      LS S  AS+ S    R L+ +  V S  
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294

Query: 94  SFGVYVKS*SLIL 56
           + G +  S  LIL
Sbjct: 295 AIGGFAFSDDLIL 307


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
 Frame = -3

Query: 701 LPRQHLPXXGNQPDHQSRSXHHHPRLTPFHQSLTPNRRSSRRVKPPLSSEAPSAYLTPSS 522
           +P+Q  P   N P H     H   +   F + + P  ++  RV PP    AP     P S
Sbjct: 404 VPKQTPPPTPNAPSHS----HQVDQFAEF-KLVEP--KTPTRVAPPPPPSAPPTIKFPIS 456

Query: 521 LG-MXKGVSPPYFQVNDESQASRLISRHSTHTPLPSSNSPP 402
            G      +PP          SR+ +   +  P   S SPP
Sbjct: 457 TGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP 497


>AL132948-12|CAD31814.1|  283|Caenorhabditis elegans Hypothetical
           protein Y39B6A.16 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -3

Query: 632 PRLTPFHQSLTPNRRSSRRVKPPLSSEAPSAYLTPSSLGMXKGVSPPY-FQVNDESQASR 456
           P  +P  ++ T    S+ +  PP S E P  +   +S+G     +PP+ F    + +A R
Sbjct: 214 PAKSPGSKAQTTKCTSNYQSHPPASFETPIHHPPKTSMGFTTPANPPHMFPYLKKHEAQR 273

Query: 455 LISRHSTH 432
              +H  H
Sbjct: 274 --EKHKEH 279


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 566  PLSSEAPSAYLTPSSLGMXKGVSPP 492
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 566  PLSSEAPSAYLTPSSLGMXKGVSPP 492
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,559
Number of Sequences: 27780
Number of extensions: 300639
Number of successful extensions: 1072
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)