Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_K23
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   2.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   2.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.7  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/60 (18%), Positives = 25/60 (41%)
 Frame = -2

Query: 550 FGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSAD 371
           +G  G +I+ +    +   G  ++   ++ +     + Y   AIN   YE+   +F   +
Sbjct: 187 YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVE 246


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/60 (18%), Positives = 25/60 (41%)
 Frame = -2

Query: 550 FGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSAD 371
           +G  G +I+ +    +   G  ++   ++ +     + Y   AIN   YE+   +F   +
Sbjct: 187 YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVE 246


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 607 RIWSXIQDGRGYLPCSNW 660
           R +  I+D  GY PC  W
Sbjct: 474 RFYDGIRDMIGYYPCCWW 491


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 607 RIWSXIQDGRGYLPCSNW 660
           R +  I+D  GY PC  W
Sbjct: 527 RFYDGIRDMIGYYPCCWW 544


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 379  SADGKPAHKDLGLFYGSSYFCGPDGVRCP 293
            +AD KP  K    F       GP+G++ P
Sbjct: 1119 TADNKPQLKPQKPFTSPGGIPGPNGIKMP 1147


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 541 NGAEIVFNPSATIAGEGGSEYMWNVEARNAAITN 440
           +G +I+   S+ I     +EY+W V  +   I N
Sbjct: 352 SGIKIIKQISSNIYERQNNEYIWIVSNKYQKIAN 385


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 172 DCSRTCPGVGSCNNN 216
           DC  TCP    C N+
Sbjct: 756 DCEMTCPAGCKCYND 770


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,314
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)