Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_K19
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   208   4e-54
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   201   6e-52
10_07_0190 + 13931399-13931600,13931720-13932003,13932158-13933303     31   1.0  
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    29   3.1  
11_06_0585 - 25230630-25230743,25230840-25231122,25231203-252313...    28   9.4  

>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  208 bits (508), Expect = 4e-54
 Identities = 99/153 (64%), Positives = 116/153 (75%)
 Frame = -2

Query: 577 PVRHNKGFRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKSIVLDQGIHKKDGKVIK 398
           P + ++G RKVACIGAWHP RVS+TVARAGQ GYHHRTEMNKK   +      K G+   
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295

Query: 397 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 218
           + A TE+D +EK ITPMGGFPHYG V  D++MIKGCC+GPKKR++TLR+SL   T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355

Query: 217 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 119
           E+I LKFIDTSSKFGHGRFQT  +K  F G LK
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  201 bits (490), Expect = 6e-52
 Identities = 95/145 (65%), Positives = 112/145 (77%)
 Frame = -2

Query: 577 PVRHNKGFRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKSIVLDQGIHKKDGKVIK 398
           P + ++G RKVACIGAWHP RVS+TVARAGQ GYHHRTEMNKK   +      K G+   
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295

Query: 397 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 218
           + A TE+D +EK ITPMGGFPHYG V  D++MIKGCC+GPKKR++TLR+SL   T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355

Query: 217 EKINLKFIDTSSKFGHGRFQTPADK 143
           E+I LKFIDTSSKFGHGRFQT  +K
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQTTDEK 380


>10_07_0190 + 13931399-13931600,13931720-13932003,13932158-13933303
          Length = 543

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/75 (26%), Positives = 36/75 (48%)
 Frame = -2

Query: 616 QRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKSIVL 437
           ++G+F    KR +P    K   +VA  GAW+     + V ++ + G  +    +KK++V 
Sbjct: 75  EKGYFYFFSKREFPTSSKKRPLRVAEGGAWNSSGAVYKVVKSSKSGGGYDVG-HKKTLVF 133

Query: 436 DQGIHKKDGKVIKNN 392
            Q     D + +K N
Sbjct: 134 HQRF-PGDKEAVKTN 147


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 376  DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 281
            D +  + +P+GG P YG ++ D  +   C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402


>11_06_0585 -
           25230630-25230743,25230840-25231122,25231203-25231373,
           25231451-25232298,25232384-25232812,25232889-25233266,
           25233396-25233488
          Length = 771

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 637 VXQGPRXQRGHFLVAHKRXYPVRHNKG 557
           V +G R + GH  + HK+ +P+R   G
Sbjct: 684 VAKGGRHKEGHPTLGHKKDFPIRQQVG 710


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,237,856
Number of Sequences: 37544
Number of extensions: 426407
Number of successful extensions: 1008
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)