Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_K19
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   289   3e-78
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   289   3e-78
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   289   3e-78
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   289   3e-78
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   289   3e-78
BT021953-1|AAX51658.1|  393|Drosophila melanogaster GH07821p pro...    29   9.3  
BT010210-1|AAQ23528.1|  711|Drosophila melanogaster RH61964p pro...    29   9.3  
AE014297-4192|AAF56757.1|  393|Drosophila melanogaster CG12261-P...    29   9.3  
AE014134-965|AAN10554.1|  711|Drosophila melanogaster CG11147-PB...    29   9.3  
AE014134-964|AAF52284.2|  711|Drosophila melanogaster CG11147-PA...    29   9.3  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  289 bits (709), Expect = 3e-78
 Identities = 138/189 (73%), Positives = 154/189 (81%)
 Frame = -2

Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
           Q E    +GV +G +  +G     H +  P + +KG RKVACIGAWHP RVS TVARAGQ
Sbjct: 224 QDEMIDCVGVTKG-KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 282

Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
           KGYHHRTE+NKK   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFV
Sbjct: 283 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 342

Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
           MIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG 
Sbjct: 343 MIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGP 402

Query: 124 LKKDRIREE 98
           LKKDR++EE
Sbjct: 403 LKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  289 bits (709), Expect = 3e-78
 Identities = 138/189 (73%), Positives = 154/189 (81%)
 Frame = -2

Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
           Q E    +GV +G +  +G     H +  P + +KG RKVACIGAWHP RVS TVARAGQ
Sbjct: 213 QDEMIDCVGVTKG-KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 271

Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
           KGYHHRTE+NKK   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFV
Sbjct: 272 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 331

Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
           MIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG 
Sbjct: 332 MIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGP 391

Query: 124 LKKDRIREE 98
           LKKDR++EE
Sbjct: 392 LKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  289 bits (709), Expect = 3e-78
 Identities = 138/189 (73%), Positives = 154/189 (81%)
 Frame = -2

Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
           Q E    +GV +G +  +G     H +  P + +KG RKVACIGAWHP RVS TVARAGQ
Sbjct: 200 QDEMIDCVGVTKG-KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 258

Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
           KGYHHRTE+NKK   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFV
Sbjct: 259 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 318

Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
           MIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG 
Sbjct: 319 MIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGP 378

Query: 124 LKKDRIREE 98
           LKKDR++EE
Sbjct: 379 LKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  289 bits (709), Expect = 3e-78
 Identities = 138/189 (73%), Positives = 154/189 (81%)
 Frame = -2

Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
           Q E    +GV +G +  +G     H +  P + +KG RKVACIGAWHP RVS TVARAGQ
Sbjct: 200 QDEMIDCVGVTKG-KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 258

Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
           KGYHHRTE+NKK   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFV
Sbjct: 259 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 318

Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
           MIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG 
Sbjct: 319 MIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGP 378

Query: 124 LKKDRIREE 98
           LKKDR++EE
Sbjct: 379 LKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  289 bits (709), Expect = 3e-78
 Identities = 138/189 (73%), Positives = 154/189 (81%)
 Frame = -2

Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
           Q E    +GV +G +  +G     H +  P + +KG RKVACIGAWHP RVS TVARAGQ
Sbjct: 213 QDEMIDCVGVTKG-KGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 271

Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
           KGYHHRTE+NKK   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFV
Sbjct: 272 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 331

Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
           MIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG 
Sbjct: 332 MIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGP 391

Query: 124 LKKDRIREE 98
           LKKDR++EE
Sbjct: 392 LKKDRLKEE 400


>BT021953-1|AAX51658.1|  393|Drosophila melanogaster GH07821p
           protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 290 ATLDHHKVV--VYFTIMGETSHWCNGFLRQVILSRCIVFNNFAILFVDSLVQYD 445
           ATLD  K +  +YF + G  S+    F  + +L++C+  + +  +    LVQY+
Sbjct: 157 ATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLVQYE 210


>BT010210-1|AAQ23528.1|  711|Drosophila melanogaster RH61964p
           protein.
          Length = 711

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 496 RAGQKGYHHRTEMNKKSI--VLDQGIHKKDGKVIKNNASTEYDLSEKSI 356
           RA   GY H  +    SI  V++ GIH  DG V     S   D++++ +
Sbjct: 417 RATTVGYLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQV 465


>AE014297-4192|AAF56757.1|  393|Drosophila melanogaster CG12261-PA
           protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 290 ATLDHHKVV--VYFTIMGETSHWCNGFLRQVILSRCIVFNNFAILFVDSLVQYD 445
           ATLD  K +  +YF + G  S+    F  + +L++C+  + +  +    LVQY+
Sbjct: 157 ATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLVQYE 210


>AE014134-965|AAN10554.1|  711|Drosophila melanogaster CG11147-PB,
           isoform B protein.
          Length = 711

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 496 RAGQKGYHHRTEMNKKSI--VLDQGIHKKDGKVIKNNASTEYDLSEKSI 356
           RA   GY H  +    SI  V++ GIH  DG V     S   D++++ +
Sbjct: 417 RATTVGYLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQV 465


>AE014134-964|AAF52284.2|  711|Drosophila melanogaster CG11147-PA,
           isoform A protein.
          Length = 711

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 496 RAGQKGYHHRTEMNKKSI--VLDQGIHKKDGKVIKNNASTEYDLSEKSI 356
           RA   GY H  +    SI  V++ GIH  DG V     S   D++++ +
Sbjct: 417 RATTVGYLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQV 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,012,850
Number of Sequences: 53049
Number of extensions: 708520
Number of successful extensions: 1691
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)