Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_K19
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 222 2e-58
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 222 2e-58
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 222 2e-58
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 222 2e-58
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 222 2e-58
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 222 2e-58
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 220 8e-58
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 220 8e-58
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 28 6.4
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 222 bits (543), Expect = 2e-58
Identities = 110/188 (58%), Positives = 136/188 (72%)
Frame = -2
Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
Q E IGV +G +G H + P + +KG RKVACIGAWHP RV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRG-HGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N K + + ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 388
Query: 124 LKKDRIRE 101
LK+D + E
Sbjct: 389 LKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 222 bits (543), Expect = 2e-58
Identities = 110/188 (58%), Positives = 136/188 (72%)
Frame = -2
Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
Q E IGV +G +G H + P + +KG RKVACIGAWHP RV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRG-HGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N K + + ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 388
Query: 124 LKKDRIRE 101
LK+D + E
Sbjct: 389 LKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 222 bits (543), Expect = 2e-58
Identities = 110/188 (58%), Positives = 136/188 (72%)
Frame = -2
Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
Q E IGV +G +G H + P + +KG RKVACIGAWHP RV+FTVARAGQ
Sbjct: 115 QDEMIDTIGVTRG-HGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 173
Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N K + + ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 174 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 230
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 231 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 290
Query: 124 LKKDRIRE 101
LK+D + E
Sbjct: 291 LKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 222 bits (543), Expect = 2e-58
Identities = 110/188 (58%), Positives = 136/188 (72%)
Frame = -2
Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
Q E IGV +G +G H + P + +KG RKVACIGAWHP RV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRG-HGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N K + + ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 388
Query: 124 LKKDRIRE 101
LK+D + E
Sbjct: 389 LKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 222 bits (543), Expect = 2e-58
Identities = 110/188 (58%), Positives = 136/188 (72%)
Frame = -2
Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
Q E IGV +G +G H + P + +KG RKVACIGAWHP RV+FTVARAGQ
Sbjct: 115 QDEMIDTIGVTRG-HGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 173
Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N K + + ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 174 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 230
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 231 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 290
Query: 124 LKKDRIRE 101
LK+D + E
Sbjct: 291 LKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 222 bits (543), Expect = 2e-58
Identities = 110/188 (58%), Positives = 136/188 (72%)
Frame = -2
Query: 664 QXEXXXXIGVXQGPRXQRGHFLVAHKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQ 485
Q E IGV +G +G H + P + +KG RKVACIGAWHP RV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRG-HGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N K + + ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGT 125
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGK 388
Query: 124 LKKDRIRE 101
LK+D + E
Sbjct: 389 LKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 220 bits (538), Expect = 8e-58
Identities = 103/164 (62%), Positives = 127/164 (77%)
Frame = -2
Query: 592 HKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKSIVLDQGIHKKD 413
H + P + +KG RKVACIGAWHP RV+FTVARAGQKG+HHRT +N K + + ++
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 247
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 248 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 304
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 101
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 305 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 642 LGSPRGQGXKGVTFWWHTKEXTP*DTTRVLGKLPAL 535
+G RG G KGVT WHTK+ P T + L K+ +
Sbjct: 172 IGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACI 206
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 220 bits (538), Expect = 8e-58
Identities = 103/164 (62%), Positives = 127/164 (77%)
Frame = -2
Query: 592 HKRXYPVRHNKGFRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKSIVLDQGIHKKD 413
H + P + +KG RKVACIGAWHP RV+FTVARAGQKG+HHRT +N K + + ++
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEE 247
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL T
Sbjct: 248 GK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQT 304
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 101
KR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 305 KRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 642 LGSPRGQGXKGVTFWWHTKEXTP*DTTRVLGKLPAL 535
+G RG G KGVT WHTK+ P T + L K+ +
Sbjct: 172 IGVTRGHGFKGVTSRWHTKK-LPRKTHKGLRKVACI 206
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -2
Query: 577 PVRHNKGFRKVACIGAWHPFRVSFTVARAGQKGYHHRTEMNKKSIVLDQGIHKK 416
P +HNK FRK A + +H + +V RA + G H + K+ L IH K
Sbjct: 193 PPKHNKIFRKAASVAHYH--KNGKSVFRASRNGPHR--VIATKNEFLKSHIHSK 242
>Z81542-9|CAI79191.1| 400|Caenorhabditis elegans Hypothetical
protein F49A5.5b protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +2
Query: 341 TSHWCN---GFLRQVILSRCIVFNNFAILFVDSLVQYDRFLVHFSTVMITFL-TSTSYSE 508
T+HW N G L ++I+ F + + + H ST+ T S+SYS
Sbjct: 30 TNHWKNILIGGLAEIIIIVFAFMLTFILAKQPACETVTTSIFHTSTLPSTLTYASSSYST 89
Query: 509 RHPKRMPSSNAGNFPKTLVVSYGVXSFVCHQKV 607
+ K +++ PKTL V+ S H K+
Sbjct: 90 KPDKSSIATSTTLKPKTLPVTTTSNSLSTHTKL 122
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 607 HFLVAHKRXYPVRHNKGFRKVACIGAWH--PFRVSFTVARAGQKGYH 473
HF + + YP H +G + IG + PF SF + + GQK Y+
Sbjct: 90 HFKIQSIKGYPTPHKQGVI-INVIGTVNLRPFLQSFLLGQQGQKKYY 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,627,345
Number of Sequences: 27780
Number of extensions: 370379
Number of successful extensions: 919
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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