Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_K17
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 293 2e-80
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 289 4e-79
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 113 2e-26
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 58 1e-09
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.24
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.73
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.97
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 27 2.2
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 27 3.0
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 26 5.2
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.2
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 6.8
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.0
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 25 9.0
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 293 bits (719), Expect = 2e-80
Identities = 134/181 (74%), Positives = 150/181 (82%), Gaps = 3/181 (1%)
Frame = -2
Query: 664 LPPYP---LPTGHVRAIXXAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 494
L PYP P I A KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+L
Sbjct: 263 LVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLL 322
Query: 493 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 314
YRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCML
Sbjct: 323 YRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCML 382
Query: 313 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGVGMEEGEFSEAREDLAALEKDYEEVGMD 134
SNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVG GMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 383 SNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 442
Query: 133 S 131
S
Sbjct: 443 S 443
Score = 51.6 bits (118), Expect = 1e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -3
Query: 699 LDXPEFQTNLVPYPRIHFPLVTYAP 625
+D EFQTNLVPYPRIHFPLVTY+P
Sbjct: 254 VDLNEFQTNLVPYPRIHFPLVTYSP 278
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 289 bits (708), Expect = 4e-79
Identities = 133/181 (73%), Positives = 148/181 (81%), Gaps = 3/181 (1%)
Frame = -2
Query: 664 LPPYP---LPTGHVRAIXXAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 494
L PYP P I A KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+L
Sbjct: 259 LVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLL 318
Query: 493 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 314
YRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCML
Sbjct: 319 YRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCML 378
Query: 313 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGVGMEEGEFSEAREDLAALEKDYEEVGMD 134
SNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVG GMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 379 SNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
Query: 133 S 131
S
Sbjct: 439 S 439
Score = 53.2 bits (122), Expect = 4e-08
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -3
Query: 699 LDXPEFQTNLVPYPRIHFPLVTYAP 625
+D EFQTNLVPYPRIHFPLVTYAP
Sbjct: 250 VDLAEFQTNLVPYPRIHFPLVTYAP 274
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 113 bits (273), Expect = 2e-26
Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = -2
Query: 598 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQF 419
+ +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + F
Sbjct: 282 QAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYF 341
Query: 418 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRA 239
V+W P + PP DL + + + N+T+I E + RL +F M+ ++A
Sbjct: 342 VEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKA 393
Query: 238 FVHWYVGVGMEEGEFSEAR---EDLAALEKDYEEVGMD 134
F+HWY G GM+E EF+EA DL + + Y+E G+D
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 31.1 bits (67), Expect = 0.18
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 696 DXPEFQTNLVPYPRIHFPLVTYAP 625
D + N+VP+PR+HF +V +AP
Sbjct: 249 DLRKLAVNMVPFPRLHFFMVGFAP 272
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 58.4 bits (135), Expect = 1e-09
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Frame = -2
Query: 589 SVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 413
+V ++ P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+
Sbjct: 291 TVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIP 350
Query: 412 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 233
W P +V ++ + P + ++ + ML+N T+IA + R ++D + + AF+
Sbjct: 351 WGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFL 405
Query: 232 HWYVGVGMEE---GEFSEAREDLAALEKDYE 149
Y + E EF +R+ +A L +YE
Sbjct: 406 EQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 675 NLVPYPRIHFPLVTYAP 625
+L+P PR HF L +Y P
Sbjct: 259 SLIPSPRCHFLLTSYTP 275
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 489 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 28.7 bits (61), Expect = 0.97
Identities = 29/105 (27%), Positives = 37/105 (35%)
Frame = -3
Query: 669 VPYPRIHFPLVTYAPSXXPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 490
VP P + P+V APS P+ P P S + P P S
Sbjct: 589 VPQPPVA-PVVPEAPSV-PQPPVAPVAPEVPSVPQRPAVPV-----VPEAPSVPQPPAAP 641
Query: 489 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
VV P + RP++P P S PV V + PP P
Sbjct: 642 VVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 25.4 bits (53), Expect = 9.0
Identities = 36/126 (28%), Positives = 43/126 (34%), Gaps = 12/126 (9%)
Frame = -3
Query: 690 PEFQTNLVPYPRIHFPLVTYAPSXX--PRRPTMNSFPS----PRSQTHASSPPTRW*NAT 529
P T VP P P+V APS P P PS P + +P A
Sbjct: 507 PSVITPSVPQPPAA-PVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAV 565
Query: 528 PVMASTW------LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 367
PV+ +A V S P+ P +P PSV V P SV
Sbjct: 566 PVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAV 625
Query: 366 PWCPEA 349
P PEA
Sbjct: 626 PVVPEA 631
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.73
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 669 VPYPRIHFPLVTYAPSXXPRRPTMNSFPSPRSQTHASSPPTR 544
VP P P V+ S P P N+ PSP S + AS+ P R
Sbjct: 1239 VPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.97
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -3
Query: 624 SXXPRRPTM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPS 451
S P PT+ S +P + T+ ++ + +TPV ++ CT TS P T
Sbjct: 405 STTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTP 462
Query: 450 LPSKPSVLSNSSTGVQPVSRSVSTTSHP 367
+ S P +N +T S TS P
Sbjct: 463 VTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -3
Query: 585 SPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGV 406
+P + T+ ++ + +TPV ++ CT TS P T P S ++ S++
Sbjct: 525 TPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTS 583
Query: 405 QPVSRSVSTTS 373
PV+ + TTS
Sbjct: 584 TPVTTTNCTTS 594
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 577 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 452
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 449 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 592
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 699 LDXPEFQTNLVPYPRIHFPLVT--YAPSXXPRRPTMNSFPSPRSQTHASSPPTRW*NATP 526
++ PE +TN +P HFP T AP+ +P S + T+ N TP
Sbjct: 371 VEVPENETNQIPTTEEHFPATTEEVAPA-SEEKPATGPAEESTSTQNVEQASTQNDNGTP 429
Query: 525 V 523
+
Sbjct: 430 I 430
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -3
Query: 285 GLALTTSSTSCTPSVLSCTGTSVWVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 112
G+ TS TS T S S+ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 111 EPKSTK 94
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 589 KAVHGRPSRXX*WRVRDQWEVDTGVRHQVSL 681
K +H RP + WR +QWE TG +++L
Sbjct: 21 KIIHTRPHKKCDWRSWEQWE-STGNPVRIAL 50
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 453 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 367
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 472 WVRRHHGTAYSKPCTCHDGG 531
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 456 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 361
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 269 QVRPHVRQACFRALVRRCGYGGGRVLRS 186
Q+ R+ C+R+ VR C GG +R+
Sbjct: 270 QIHEESRKFCYRSWVRPCAVYGGADIRA 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,124,963
Number of Sequences: 5004
Number of extensions: 67995
Number of successful extensions: 252
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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