Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_K13
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211...    46   2e-05
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138...    44   1e-04
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806...    42   5e-04
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912...    28   6.9  

>05_01_0273 +
           2115257-2115589,2115706-2115766,2115876-2115970,
           2116072-2116184,2116278-2116551,2116923-2117036,
           2117169-2117233,2117325-2117466,2117547-2117666,
           2118153-2118241,2118349-2118433
          Length = 496

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/72 (33%), Positives = 30/72 (41%)
 Frame = -1

Query: 489 LPGXTXTIXXKEXTXXGXE*XVRXGQXGHTXXXXGFXXLEXPKPXGPXWXXGEVFXGK** 310
           +P    TI  K       +  V+  Q G T    GF   + P P GP W  G+VF G   
Sbjct: 421 MPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYH 480

Query: 309 TXFEXGXPXXGF 274
           T F+ G    GF
Sbjct: 481 TVFDFGKDRIGF 492


>05_07_0145 +
           28012268-28012624,28012734-28012794,28013758-28013852,
           28013944-28014056,28014436-28014604,28014677-28014716,
           28014797-28014861,28015485-28015598,28015687-28015751,
           28015927-28016083,28016167-28016286,28016447-28016535,
           28016631-28016715
          Length = 509

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = -1

Query: 489 LPGXTXTIXXKEXTXXGXE*XVRXGQXGHTXXXXGFXXLEXPKPXGPXWXXGEVFXGK** 310
           +P  + TI  K+      E  ++ G+        GF  ++ P P GP W  G+VF G   
Sbjct: 434 MPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYH 493

Query: 309 TXFEXGXPXXGF 274
           T F+ G    GF
Sbjct: 494 TVFDYGKMRVGF 505


>01_06_0158 -
           27079262-27079346,27079662-27079750,27080540-27080659,
           27080738-27080894,27081167-27081231,27081323-27081436,
           27082109-27082178,27082412-27082642,27082963-27083039,
           27083143-27083237,27084514-27084574,27084678-27085073
          Length = 519

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -1

Query: 489 LPGXTXTIXXKEXTXXGXE*XVRXGQXGHTXXXXGFXXLEXPKPXGPXWXXGEVFXGK** 310
           +P    TI   +      +  ++ G+   T    GF  ++ P P GP W  G+VF G   
Sbjct: 444 MPDIAFTIGGNKFVLKPEQYILKVGEGTATQCISGFTAMDIPPPRGPLWILGDVFMGAYH 503

Query: 309 TXFEXGXPXXGF 274
           T F+ G    GF
Sbjct: 504 TVFDYGNLKVGF 515


>01_02_0039 -
           10490522-10490606,10490674-10490810,10491107-10491248,
           10491355-10491419,10491528-10491641,10491846-10492119,
           10492215-10492327,10492405-10492499,10492602-10492662,
           10492774-10493103
          Length = 471

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 426 VRXGQXGHTXXXXGFXXLEXPKPXGPXW 343
           V+  Q G T    GF   + P P GP W
Sbjct: 401 VKLEQQGQTVCISGFMAFDVPPPRGPLW 428


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,091,380
Number of Sequences: 37544
Number of extensions: 114132
Number of successful extensions: 81
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)