Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_K13
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50755-2|CAA90633.1|  444|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AF077544-5|AAK39240.1|  398|Caenorhabditis elegans Aspartyl prot...    47   1e-05

>Z50755-2|CAA90633.1|  444|Caenorhabditis elegans Hypothetical
           protein R12H7.2 protein.
          Length = 444

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 31/120 (25%), Positives = 49/120 (40%)
 Frame = -1

Query: 633 AQGXXAIXKXGXXLXPGPPRXGXPXKGXVGAXAIAFGXXFXEXNLXPHLPGXTXTIXXKE 454
           + G  AI   G  L  GP       +  +GA  +  G      +  P LP  +  I  +E
Sbjct: 290 SNGCQAIADTGTSLIAGPKAQIEAIQNFIGAEPLIKGEYMISCDKVPTLPPVSFVIGGQE 349

Query: 453 XTXXGXE*XVRXGQXGHTXXXXGFXXLEXPKPXGPXWXXGEVFXGK**TXFEXGXPXXGF 274
            +  G +  ++  Q G T    GF  ++ P+  G  W  G+VF G+  + F+      GF
Sbjct: 350 FSLKGEDYVLKVSQGGKTICLSGFMGIDLPERVGELWILGDVFIGRYYSVFDFDQNRVGF 409


>AF077544-5|AAK39240.1|  398|Caenorhabditis elegans Aspartyl
           protease protein 3 protein.
          Length = 398

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
 Frame = -1

Query: 618 AIXKXGXXLXPGPPRXGXPXKGXVGAXAIAFGXXFXEXNLXPHLPGXTXTIXXKEXTXXG 439
           +I   G  L  GP       +  +G   +  G    E +  P LP  T  +  +     G
Sbjct: 276 SIVDTGTSLLTGPTDVIKKIQHKIGGIPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQG 335

Query: 438 XE*XVRXGQX-GHTXXXXGFXXLEXPKPXGPXWXXGEVFXGK**TXFEXGXPXXGF 274
            +  ++     G +    GF  ++ P P GP W  G+VF G+  + F+ G    GF
Sbjct: 336 KDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGNKRVGF 391


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,075,932
Number of Sequences: 27780
Number of extensions: 83352
Number of successful extensions: 51
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)