Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_K08
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p...    30   1.5  
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha...    30   1.5  
AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical...    29   4.5  
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass...    28   7.9  
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass...    28   7.9  

>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 666  D*TCLCLEKXDTELCXNCSTNLWN 595
            D +C+C      E+C NC+TN W+
Sbjct: 1148 DGSCVCPPNTVGEMCENCTTNAWD 1171


>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 666  D*TCLCLEKXDTELCXNCSTNLWN 595
            D +C+C      E+C NC+TN W+
Sbjct: 1148 DGSCVCPPNTVGEMCENCTTNAWD 1171


>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3102

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 666  D*TCLCLEKXDTELCXNCSTNLWN 595
            D +C+C      E+C NC+TN W+
Sbjct: 1148 DGSCVCPPNTVGEMCENCTTNAWD 1171


>AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical
           protein Y17G7B.13 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = -1

Query: 503 DLSEKDALEFSKQAHLIRKQADTLYKTMKDLFTVPDGLSFWEFFSARVVHFKKITA---K 333
           ++ E D ++  + A +    A+   +  +DLF +PD  SF+   + + VH   I     +
Sbjct: 85  NIVEFDTVDVHQLAKIPSLPANQKIEKFEDLFELPDEYSFFPLNTFQRVHGSVIVTNPKR 144

Query: 332 LTSDELLEMVHEPL 291
           LTS ++L+    P+
Sbjct: 145 LTSLQMLDATQLPM 158


>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform e protein.
          Length = 2702

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = -1

Query: 653  YA*RXPTLNCVLIARRICGIRSEPLMLLKHPTCLETVKRMRAYVGNTPSWDLSEKDALEF 474
            Y+   PTL    + R +  I ++PL +   PT + T +     VG   ++++ E++ +  
Sbjct: 882  YSLSKPTLAQETVLREVVRIAAQPLFISAEPTYMRTKESSEDIVGVGIAYNVPEENLISA 941

Query: 473  SK 468
             K
Sbjct: 942  IK 943


>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform c protein.
          Length = 7548

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = -1

Query: 653  YA*RXPTLNCVLIARRICGIRSEPLMLLKHPTCLETVKRMRAYVGNTPSWDLSEKDALEF 474
            Y+   PTL    + R +  I ++PL +   PT + T +     VG   ++++ E++ +  
Sbjct: 5728 YSLSKPTLAQETVLREVVRIAAQPLFISAEPTYMRTKESSEDIVGVGIAYNVPEENLISA 5787

Query: 473  SK 468
             K
Sbjct: 5788 IK 5789


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,224,845
Number of Sequences: 27780
Number of extensions: 245765
Number of successful extensions: 615
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)