Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_K01
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.073
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.073
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.073
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.073
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.52
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.52
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.68
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 31 0.90
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.90
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.2
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 1.6
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 1.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 3.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.6
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 4.8
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 4.8
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 6.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 6.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 6.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 6.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 6.4
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 6.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 8.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 8.4
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.073
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGG--PRPXXXXG 419
PP P P P P GF PPP G GG PP GG P P G
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFI---PPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Query: 418 XXXKPXFXGPXKKIPXP 368
P G P P
Sbjct: 104 IPPPPPMFGAPPPPPPP 120
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 500 PPPXGXGGXXPPQKXFXGGXXAP 432
PPP G GG PP F GG P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPP 97
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 379 FFXXGPXXXVSXXAPFXXGAXXPPXKXFWGGXXPPXPXGGG 501
FF P P G PP F GG PP P GG
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.073
Identities = 30/144 (20%), Positives = 33/144 (22%), Gaps = 7/144 (4%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPP 566
PP G PP P PP PP + PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 565 XKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPR-------PXXXXGXXXK 407
PP PPP G G PP + P P +
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 358
Query: 406 PXFXGPXKKIPXPXXXXENPXXXP 335
P GP K E P P
Sbjct: 359 PPRGGPGKSSEESSESREGPRGGP 382
Score = 33.1 bits (72), Expect = 0.22
Identities = 29/115 (25%), Positives = 35/115 (30%), Gaps = 1/115 (0%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXXKXXX-GXVXXPXPPXKKKXP 569
PP G G PP R P PP+ G P PP +K+
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPP-RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 339
Query: 568 PXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXXXKP 404
P +++ P G PP PP G G GPR G P
Sbjct: 340 P-ERSPPTGSPPTGSPP---TGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 390
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXX 413
P PP K P + PP PPP G PP G P P G
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSP 289
Query: 412 XKPXFXGPXKKIP 374
P P P
Sbjct: 290 PPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.073
Identities = 30/144 (20%), Positives = 33/144 (22%), Gaps = 7/144 (4%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPP 566
PP G PP P PP PP + PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 565 XKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPR-------PXXXXGXXXK 407
PP PPP G G PP + P P +
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 379
Query: 406 PXFXGPXKKIPXPXXXXENPXXXP 335
P GP K E P P
Sbjct: 380 PPRGGPGKSSEESSESREGPRGGP 403
Score = 33.1 bits (72), Expect = 0.22
Identities = 29/115 (25%), Positives = 35/115 (30%), Gaps = 1/115 (0%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXXKXXX-GXVXXPXPPXKKKXP 569
PP G G PP R P PP+ G P PP +K+
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPP-RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 360
Query: 568 PXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXXXKP 404
P +++ P G PP PP G G GPR G P
Sbjct: 361 P-ERSPPTGSPPTGSPP---TGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 411
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXX 413
P PP K P + PP PPP G PP G P P G
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSP 310
Query: 412 XKPXFXGPXKKIP 374
P P P
Sbjct: 311 PPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.073
Identities = 30/144 (20%), Positives = 33/144 (22%), Gaps = 7/144 (4%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPP 566
PP G PP P PP PP + PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 565 XKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPR-------PXXXXGXXXK 407
PP PPP G G PP + P P +
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 364
Query: 406 PXFXGPXKKIPXPXXXXENPXXXP 335
P GP K E P P
Sbjct: 365 PPRGGPGKSSEESSESREGPRGGP 388
Score = 33.1 bits (72), Expect = 0.22
Identities = 29/115 (25%), Positives = 35/115 (30%), Gaps = 1/115 (0%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXXKXXX-GXVXXPXPPXKKKXP 569
PP G G PP R P PP+ G P PP +K+
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPP-RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 345
Query: 568 PXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXXXKP 404
P +++ P G PP PP G G GPR G P
Sbjct: 346 P-ERSPPTGSPPTGSPP---TGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 396
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXX 413
P PP K P + PP PPP G PP G P P G
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSP 295
Query: 412 XKPXFXGPXKKIP 374
P P P
Sbjct: 296 PPPRAGSPPPPPP 308
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRP 434
P PP PP P P PP PPP G P G P P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPP----PXGXGGXXPP 464
P PP PP P P PG PP P G GG PP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 336
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXX-KXXXGXVXXPXPPXKKKXP 569
PP G PP R P PP G + P PP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 568 PXKKTXPXXEKNPGXPPGFXXXXPPP 491
P P + P P G PPP
Sbjct: 360 PGMYPPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRP 434
P PP PP P P PP PPP G P G P P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPP----PXGXGGXXPP 464
P PP PP P P PG PP P G GG PP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 346
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = -3
Query: 745 PPXXXGXXXXXXXGGXXXPPXQKKRXXXPXXXXXPPRXXX-KXXXGXVXXPXPPXKKKXP 569
PP G PP R P PP G + P PP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 568 PXKKTXPXXEKNPGXPPGFXXXXPPP 491
P P + P P G PPP
Sbjct: 370 PGMYPPPPPSRPPAPPSGHGMIPPPP 395
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKK-----XXXGGPRP 434
P PP PP P G PP PPP GG PP GGP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 433 XXXXG 419
G
Sbjct: 787 PPPPG 791
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPP--GFXXXXPPPXGX----GGXXPPKKXXXGGPRP 434
PP PP P G PP G PPP G GG PP G P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKK-----XXXGGPRP 434
P PP PP P G PP PPP GG PP GGP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 433 XXXXG 419
G
Sbjct: 787 PPPPG 791
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPP--GFXXXXPPPXGX----GGXXPPKKXXXGGPRP 434
PP PP P G PP G PPP G GG PP G P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKK-----XXXGGPRP 434
P PP PP P G PP PPP GG PP GGP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 433 XXXXG 419
G
Sbjct: 370 PPPPG 374
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPP--GFXXXXPPPXGX----GGXXPPKKXXXGGPRP 434
PP PP P G PP G PPP G GG PP G P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Frame = -3
Query: 598 PXP-PXKKKXPPXKKTXPXXEKN-PGXPPGFXXXXPP--PXGXGGXXP---PKKXXXGGP 440
P P P PP + P + PG PP PP P G GG P P + GGP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
Query: 439 RP 434
P
Sbjct: 823 PP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Frame = -3
Query: 598 PXP-PXKKKXPPXKKTXPXXEKN-PGXPPGFXXXXPP--PXGXGGXXP---PKKXXXGGP 440
P P P PP + P + PG PP PP P G GG P P + GGP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
Query: 439 RP 434
P
Sbjct: 823 PP 824
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 532 PGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRP 434
PG PP F PPP G G P GP P
Sbjct: 696 PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPP 728
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 KKPGGX--PRFFXXXPPPXGXGGXXPPQKXFXGGXXAPFXXGAKXETXXXGPXXKNSRXX 366
K P G PR P P G GG P Q+ G P G ET GP + +
Sbjct: 144 KCPAGPRGPRGDAGPPGPPGNGGR-PGQRGTPGEAGTPGPVGEPGETGGPGPQGRPGQ-R 201
Query: 365 GXXGKPXXXXLXXHXGPP*P 306
G G+P + G P P
Sbjct: 202 GEPGQPGTVHTPGNPGRPGP 221
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.90
Identities = 29/103 (28%), Positives = 30/103 (29%), Gaps = 12/103 (11%)
Frame = -3
Query: 706 GGXXXPPXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPX--PPXKKKXPPXKKTXPXXEKN 533
G PP Q+ P PP P PP PP P
Sbjct: 346 GSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGG 405
Query: 532 PGX----PPGFXXXX----PPPXGXGGXXPPKKXXXG--GPRP 434
PG PPG PP G GG PP G GP P
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/107 (22%), Positives = 34/107 (31%)
Frame = -3
Query: 688 PXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXKKTXPXXEKNPGXPPGFX 509
P Q++ P PP G P ++ P + P ++ G PP
Sbjct: 281 PVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAP--QQGFGAPPQGP 338
Query: 508 XXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXXXKPXFXGPXKKIPXP 368
PP G G PP++ P+ G P P P P
Sbjct: 339 PQGGPPQGSFGAPPPQQFHAPSPQ---SFGGPPPPVSSAPGNFAPPP 382
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = -3
Query: 571 PPXKKTXPXXEKNP-GXPPGFXXXXPPPXGXGGXXPPKK--XXXGGPRPXXXXGXXXKPX 401
PP P P G P GF PPP G G PP G P P P
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGF--GPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPF 470
Query: 400 FXGP 389
GP
Sbjct: 471 ARGP 474
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPP--PXGXGGXXPPKKXXXGGPRPXXX 425
P P + PP K P P PPG P P G G P G P
Sbjct: 125 PKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGP-NGEPGNKGPAGP 183
Query: 424 XGXXXKPXFXGP 389
G KP GP
Sbjct: 184 PGPGGKPGPAGP 195
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/80 (30%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Frame = -3
Query: 613 GXVXXPXPPXKKKXPPXKKTXPXX--EKNPGX--PPGFXXXXPPPXGXGGXXPPKKXXXG 446
G + P PP P P E PG PPG PP G K
Sbjct: 177 GEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQ 236
Query: 445 GPR-PXXXXGXXXKPXFXGP 389
GPR P G +P GP
Sbjct: 237 GPRGPPGIPGAPGQPGRPGP 256
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/80 (30%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Frame = -3
Query: 613 GXVXXPXPPXKKKXPPXKKTXPXX--EKNPGX--PPGFXXXXPPPXGXGGXXPPKKXXXG 446
G + P PP P P E PG PPG PP G K
Sbjct: 158 GEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQ 217
Query: 445 GPR-PXXXXGXXXKPXFXGP 389
GPR P G +P GP
Sbjct: 218 GPRGPPGIPGAPGQPGRPGP 237
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = -3
Query: 613 GXVXXPXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPP--XGXGGXXPPKKXXXGGP 440
G V P + P P E +P PPG PP G PP + G P
Sbjct: 213 GPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
Query: 439 RP 434
P
Sbjct: 273 GP 274
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = -3
Query: 598 PXP-PXKKKXPPXKKTXPXXEKN-PGXPPGFXXXXPP--PXGXGGXXPP 464
P P P PP + P + PG PP PP P G GG PP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGF---XXXXPPPXGXGGXXPP-KKXXXGGPRPX 431
P P + PP K P P PPG P GG PP + G P P
Sbjct: 138 PVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPP 197
Query: 430 XXXGXXXKPXFXG 392
G +P G
Sbjct: 198 GSPGAPGEPGRPG 210
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 529 GXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRP 434
G PPG PP G PP GGP P
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = -3
Query: 706 GGXXXPPXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXK--KTXPXXEKN 533
G PP + P P G PP PP P
Sbjct: 129 GPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGG 188
Query: 532 PGXPPGFXXXXPPPXGXGGXXPPKKXXXGGP 440
G PPG PP G GG P GGP
Sbjct: 189 QGGPPGHGGMGGPPPGQGGPGGP--GGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 529 GXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRP 434
G PPG PP G PP GGP P
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = -3
Query: 706 GGXXXPPXQKKRXXXPXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXK--KTXPXXEKN 533
G PP + P P G PP PP P
Sbjct: 409 GPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGG 468
Query: 532 PGXPPGFXXXXPPPXGXGGXXPPKKXXXGGP 440
G PPG PP G GG P GGP
Sbjct: 469 QGGPPGHGGMGGPPPGQGGPGGP--GGPGGP 497
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = -3
Query: 598 PXP-PXKKKXPPXKKTXPXXEKN-PGXPPGFXXXXPP--PXGXGGXXPP 464
P P P PP + P + PG PP PP P G GG PP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = -3
Query: 643 PPRXXXKXXXGXVXXPXPPXKK--KXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXX 470
PP G P PP + K PP P P P G PP G
Sbjct: 202 PPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPG 261
Query: 469 PP 464
PP
Sbjct: 262 PP 263
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = -3
Query: 643 PPRXXXKXXXGXVXXPXPPXKK--KXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXX 470
PP G P PP + K PP P P P G PP G
Sbjct: 202 PPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPG 261
Query: 469 PP 464
PP
Sbjct: 262 PP 263
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXG 419
P P + PP K P P PPG P G G P G P P G
Sbjct: 135 PVAPCEPTTPPPCKPCPQGPPGPPGPPG-APGDPGEAGTPG-RPGTDAAPGSPGPRGPPG 192
Query: 418 XXXKPXFXGP 389
+ GP
Sbjct: 193 PAGEAGAPGP 202
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Frame = -3
Query: 661 PXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXKK-TXPXXEKNPGXPPGFXXXXPPPXG 485
P P + G P P K P + T P + PG PPG PP
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 484 XG-GXXPPKKXXXGGPRPXXXXG 419
G P GP P G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPG 189
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Frame = -3
Query: 661 PXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXKK-TXPXXEKNPGXPPGFXXXXPPPXG 485
P P + G P P K P + T P + PG PPG PP
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 484 XG-GXXPPKKXXXGGPRPXXXXG 419
G P GP P G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPG 189
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXG 419
P P + PP K P P PPG P G G P G P P G
Sbjct: 130 PVAPCEPTTPPPCKPCPQGPPGPPGPPG-APGDPGEAGTPG-RPGTDAAPGSPGPRGPPG 187
Query: 418 XXXKPXFXGP 389
+ GP
Sbjct: 188 PAGEAGAPGP 197
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPP--PXGXGGXXPPKKXXXGGP 440
PP ++ P P +++PG PG+ PP G PP G P
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYP 759
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Frame = -3
Query: 661 PXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXKK-TXPXXEKNPGXPPGFXXXXPPPXG 485
P P + G P P K P + T P + PG PPG PP
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 484 XG-GXXPPKKXXXGGPRPXXXXG 419
G P GP P G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPG 189
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXG 419
P P + PP K P P PPG P G G P G P P G
Sbjct: 130 PVAPCEPTTPPPCKPCPQGPPGPPGPPG-APGDPGEAGTPG-RPGTDAAPGSPGPRGPPG 187
Query: 418 XXXKPXFXGP 389
+ GP
Sbjct: 188 PAGEAGAPGP 197
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Frame = -3
Query: 661 PXXXXXPPRXXXKXXXGXVXXPXPPXKKKXPPXKK-TXPXXEKNPGXPPGFXXXXPPPXG 485
P P + G P P K P + T P + PG PPG PP
Sbjct: 107 PGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGP 166
Query: 484 XG-GXXPPKKXXXGGPRPXXXXG 419
G P GP P G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPG 189
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -3
Query: 571 PPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXG--XXXKPXF 398
PP P + NPG PG P G P K GP P G KP
Sbjct: 927 PPIPVPNPIPKPNPGPGPG-------PPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGP 979
Query: 397 XGP 389
GP
Sbjct: 980 SGP 982
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/71 (26%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = -3
Query: 592 PPXKKKXPPXKKTXPXXEKNPGX--PPGFXXXXPP-PXGXGGXXPPKKXXXGGPRPXXXX 422
P K P P PG P G P P G P+ GGP P
Sbjct: 1344 PSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPNGPSNPSVPESSTGGGPSPGPSP 1403
Query: 421 GXXXKPXFXGP 389
P GP
Sbjct: 1404 NEPSNPSILGP 1414
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 529 GXPPGFXXXXPPPXGXGGXXPPKKXXXGGPRPXXXXGXXXKPXFXGP 389
G PP F PPP PP GP P G P GP
Sbjct: 86 GPPPCFGPACPPPCFGPACAPPAPIIVNGPPP--CFGPACPPPCFGP 130
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/89 (24%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = -3
Query: 589 PXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPPXGXGGXXPPKKXXXGGPR----PXXXX 422
P + K PP K P P P G P G P GP P
Sbjct: 142 PCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGND 201
Query: 421 GXXXKPXFXGPXKKIPXPXXXXENPXXXP 335
G P GP + P P P
Sbjct: 202 GAAGTPGPDGPAGESTYPEPAAPGPAGPP 230
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPP 491
P PP PP K T P P P PPP
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 598 PXPPXKKKXPPXKKTXPXXEKNPGXPPGFXXXXPPP 491
P PP PP K T P P P PPP
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,050,613
Number of Sequences: 27780
Number of extensions: 240089
Number of successful extensions: 1169
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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