Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_J19
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 34 0.14
06_01_0486 - 3455030-3455770 33 0.19
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.19
07_01_0080 + 587674-588510 31 0.77
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 31 1.0
10_03_0023 - 7151465-7152111,7152222-7152405 30 1.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 1.8
03_01_0515 - 3864796-3865425 30 1.8
12_02_1174 - 26696869-26698191 30 2.4
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 30 2.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.1
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 4.1
09_02_0543 + 10427321-10428315,10428440-10429154 28 7.2
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 7.2
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 28 9.5
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 28 9.5
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 28 9.5
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXPXXXVXS 535
P P PP P P P P PP PP + P P P P + S
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPS 1190
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P PP P P S PP P P PP P P P P
Sbjct: 1148 PLPSDSPPCQP-PLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P PP P P PP L P PP P S P P P P
Sbjct: 1159 PLPPSPPPATPPP-----PPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPP 1207
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPP-XLXPXXXXXXPPXPPXSXP 472
P PP P P S PP P PP PP P
Sbjct: 1177 PSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVP 1214
>06_01_0486 - 3455030-3455770
Length = 246
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P PP P P+ PP P PP P S P P P
Sbjct: 107 PTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPPATKTCP 160
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXP 511
P PP P P+ PP + P PP P S P P P
Sbjct: 97 PPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPP 146
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXPXXXV 529
P PP P P S PP + P PP P P P P P V
Sbjct: 82 PTPRPPPTP-PYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYV 136
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXP 511
P PP P P+ ++ PP P PP PP P GP P
Sbjct: 311 PAPPPPPPPKPAAAAPPPP--PPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
P P PP P P S PP P PP PP
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P P P P ++ PP P PP P P GP P P
Sbjct: 319 PKPAAAAPPPPPPPKAAPPP---PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P P P P PP P PP P P G P P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>07_01_0080 + 587674-588510
Length = 278
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
PP P PS S PP P PP PP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
PP P P S PP P PP PP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
PP P P SS P P PP PP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPP 119
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Frame = +2
Query: 356 PXPXXXPPXX----PXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P PP P P PP + P PP PP P P P P
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
PP P P S P P PP PP P P P
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
PP P P SS P PP PP P GP P
Sbjct: 666 PPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPP 713
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
P P PP P P PP P PP PP
Sbjct: 356 PPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
P P PP P P PP P PP P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
P PP P P SS P + P PP PP
Sbjct: 210 PSILPPLTPQPPPSSLIPPVLPLPLLNPPPPPP 242
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXP 472
PP P P PP L PP PP S P
Sbjct: 352 PPPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVP 384
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P PP P PS +S PP P PP PP P P P
Sbjct: 43 PTEASPPPLAPPPSVTSSPP--PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPP 94
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLX----PXXXXXXPPXPPXSXP 472
PP P PS +S PP P PP PP S P
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPP 107
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPP---XLXPXXXXXXPPXPPXSXP 472
P P PP P P+ S PP P PP PP P
Sbjct: 83 PPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
PP P P PP L P PP PP
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPP 165
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSS-XPPXLXP---XXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P P PP P P S PP + P PP PP P P P P
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKP 210
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
PP P P S+ PP PP PP + P P P
Sbjct: 433 PPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFAGLPVP 480
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/67 (25%), Positives = 19/67 (28%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXPXXXVXS 535
P P P P P + P PP PP + P GP P P
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAA-GAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGR 379
Query: 536 SGXXXXP 556
G P
Sbjct: 380 GGGGPPP 386
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXP 472
PP P P PP P PP PP P
Sbjct: 119 PPPPPPPHPPEDPPPHPPHPPDHPPPPPPCRVP 151
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXP 472
P PP P P PP P PP P + P
Sbjct: 31 PESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPP 67
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGPXXXXPXP 517
P PP P P + PP + P P PP P P P P
Sbjct: 377 PGVPRFPPPPPPPD--TRPPFMAPGVNARPLPPPPPGLPPAQMQMAPFGVPPGP 428
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 362 PXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXPXXXXXXGP 496
P PP P P+ PP P PP PP GP
Sbjct: 43 PRFAPPP-PQPTLPPPPPRTLPPPPPPPPPQPPVGFKVVLEVCGP 86
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 374 PPXXPXPSXSSXPPXLXPXXXXXXPPXPPXSXP 472
PP P P ++ PP P PP PP + P
Sbjct: 37 PPSRPEPDQAAPPPP--PQPHTAPPPPPPNAEP 67
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 356 PXPXXXPPXXPXPSXSSXPPXLXPXXXXXXPPXPP 460
P P P + +S PP L P PP PP
Sbjct: 82 PTPAASTPPASPTANASPPPSLPPPPPPLRPPPPP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,767,484
Number of Sequences: 37544
Number of extensions: 162692
Number of successful extensions: 1144
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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