Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_J06
(915 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.31
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.9
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 8.9
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.6 bits (56), Expect = 0.31
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 913 PPPPPPPP 890
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.31
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 912 PPPPPPPP 889
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 25.0 bits (52), Expect = 0.96
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 907 PPPPPPPXXXG 875
PPPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
Score = 25.0 bits (52), Expect = 0.96
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 858 PPPPPPPXXXG 890
PPPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 848 PPXPPPPP 825
PP PPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 846 PXPPPPPP 823
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 904 PPPPPPXXXGG 872
PPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 861 PPPPPPXXXGG 893
PPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 910 PPPPPPPPXXXG 875
P PPPPPP G
Sbjct: 341 PAPPPPPPSSSG 352
Score = 24.2 bits (50), Expect = 1.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 913 PPPPPPPPPXXXGGG 869
PP P PPPP G
Sbjct: 338 PPKPAPPPPPPSSSG 352
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 847 PXPPPPPP 824
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 846 PXPPPPPP 823
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.0 bits (47), Expect = 3.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 848 PPXPPPPPP 822
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 861 PPPPPPXXXG 890
PPPPPP G
Sbjct: 343 PPPPPPSSSG 352
Score = 21.8 bits (44), Expect = 8.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 858 PPPPPPPXXXGG 893
P PPPPP G
Sbjct: 341 PAPPPPPPSSSG 352
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 913 PPPPPPPP 890
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 910 PPPPPPPP 887
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 847 PXPPPPPP 824
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 845 PXPPPPPP 822
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 846 GXXXPPPPPP 875
G PPPPPP
Sbjct: 1855 GSPEPPPPPP 1864
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.9
Identities = 10/31 (32%), Positives = 10/31 (32%)
Frame = +1
Query: 823 GGGGGGXGGXXXXXXXXXXXXXGGGGGGGGG 915
GG G G G GGGGG
Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGGG 50
Score = 21.8 bits (44), Expect = 8.9
Identities = 10/31 (32%), Positives = 10/31 (32%)
Frame = +1
Query: 823 GGGGGGXGGXXXXXXXXXXXXXGGGGGGGGG 915
G G GG GGGGGG
Sbjct: 21 GPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,264
Number of Sequences: 438
Number of extensions: 6358
Number of successful extensions: 107
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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