Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_I18
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    31   2.4  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    31   2.4  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    31   2.4  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    29   9.7  

>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +3

Query: 234 HAPHHALCSHDHSGSGVRSQVLERLEMRLRSXXXXARXXPAXXXXXP 374
           H PHH    H H+G+G   Q  E+L+++       +R  P      P
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQEAVQQKQSRKMPLFVKAMP 709


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +3

Query: 234 HAPHHALCSHDHSGSGVRSQVLERLEMRLRSXXXXARXXPAXXXXXP 374
           H PHH    H H+G+G   Q  E+L+++       +R  P      P
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQEAVQQKQSRKMPLFVKAMP 709


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +3

Query: 234  HAPHHALCSHDHSGSGVRSQVLERLEMRLRSXXXXARXXPAXXXXXP 374
            H PHH    H H+G+G   Q  E+L+++       +R  P      P
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQLQEAVQQKQSRKMPLFVKAMP 991


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 22/91 (24%), Positives = 24/91 (26%), Gaps = 6/91 (6%)
 Frame = -3

Query: 771 PPPXXXTXPXXPXKXPPKKKKPXXXKTPXGXPGXXPXXXRXXXPXXXXXXXXP------X 610
           PPP     P  P   PP  + P     P   P   P   R   P        P       
Sbjct: 231 PPPPRTPPPTRPPTRPPTTRPPATYLPPTNKP-LPPVTTRLPPPPPSPRTPPPTRPPTRP 289

Query: 609 XTRKXPXXXXPXXXXPXKXXXXXKPPXXTPP 517
            T + P    P    P        PP   PP
Sbjct: 290 PTTRPPATYLPPTNKPLPPVTTRLPPPPPPP 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,288,134
Number of Sequences: 53049
Number of extensions: 236714
Number of successful extensions: 790
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)