Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_I08
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 281 5e-76
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 281 5e-76
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 281 5e-76
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 281 5e-76
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 281 5e-76
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 281 5e-76
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 274 3e-74
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 274 3e-74
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 35 0.067
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 281 bits (688), Expect = 5e-76
Identities = 132/198 (66%), Positives = 155/198 (78%)
Frame = -1
Query: 687 IPXDXXFAQG*MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSF 508
+ D FAQ MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+F
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Query: 507 TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYG 328
TVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 265 TVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYG 321
Query: 327 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAD 148
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+
Sbjct: 322 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 381
Query: 147 KAAFMGTLKKDRIREEAA 94
K AFMG LK+D + E A
Sbjct: 382 KRAFMGKLKRDFLAEAEA 399
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 281 bits (688), Expect = 5e-76
Identities = 132/198 (66%), Positives = 155/198 (78%)
Frame = -1
Query: 687 IPXDXXFAQG*MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSF 508
+ D FAQ MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+F
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Query: 507 TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYG 328
TVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 265 TVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYG 321
Query: 327 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAD 148
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+
Sbjct: 322 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 381
Query: 147 KAAFMGTLKKDRIREEAA 94
K AFMG LK+D + E A
Sbjct: 382 KRAFMGKLKRDFLAEAEA 399
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 281 bits (688), Expect = 5e-76
Identities = 132/198 (66%), Positives = 155/198 (78%)
Frame = -1
Query: 687 IPXDXXFAQG*MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSF 508
+ D FAQ MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+F
Sbjct: 107 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 166
Query: 507 TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYG 328
TVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 167 TVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYG 223
Query: 327 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAD 148
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+
Sbjct: 224 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 283
Query: 147 KAAFMGTLKKDRIREEAA 94
K AFMG LK+D + E A
Sbjct: 284 KRAFMGKLKRDFLAEAEA 301
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 281 bits (688), Expect = 5e-76
Identities = 132/198 (66%), Positives = 155/198 (78%)
Frame = -1
Query: 687 IPXDXXFAQG*MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSF 508
+ D FAQ MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+F
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Query: 507 TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYG 328
TVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 265 TVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYG 321
Query: 327 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAD 148
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+
Sbjct: 322 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 381
Query: 147 KAAFMGTLKKDRIREEAA 94
K AFMG LK+D + E A
Sbjct: 382 KRAFMGKLKRDFLAEAEA 399
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 281 bits (688), Expect = 5e-76
Identities = 132/198 (66%), Positives = 155/198 (78%)
Frame = -1
Query: 687 IPXDXXFAQG*MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSF 508
+ D FAQ MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+F
Sbjct: 107 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 166
Query: 507 TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYG 328
TVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 167 TVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYG 223
Query: 327 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAD 148
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+
Sbjct: 224 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 283
Query: 147 KAAFMGTLKKDRIREEAA 94
K AFMG LK+D + E A
Sbjct: 284 KRAFMGKLKRDFLAEAEA 301
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 281 bits (688), Expect = 5e-76
Identities = 132/198 (66%), Positives = 155/198 (78%)
Frame = -1
Query: 687 IPXDXXFAQG*MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSF 508
+ D FAQ MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+F
Sbjct: 205 VQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Query: 507 TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYG 328
TVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 265 TVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYG 321
Query: 327 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAD 148
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+
Sbjct: 322 IVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAE 381
Query: 147 KAAFMGTLKKDRIREEAA 94
K AFMG LK+D + E A
Sbjct: 382 KRAFMGKLKRDFLAEAEA 399
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 274 bits (673), Expect = 3e-74
Identities = 128/187 (68%), Positives = 150/187 (80%)
Frame = -1
Query: 654 MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSFTVARAGQKGYH 475
MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+FTVARAGQKG+H
Sbjct: 168 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 227
Query: 474 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 295
HRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 228 HRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 284
Query: 294 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 115
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 285 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 344
Query: 114 RIREEAA 94
+ E A
Sbjct: 345 FLAEAEA 351
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 274 bits (673), Expect = 3e-74
Identities = 128/187 (68%), Positives = 150/187 (80%)
Frame = -1
Query: 654 MIXCIGVXRAKGYQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSFTVARAGQKGYH 475
MI IGV R G++GVT RWHTKKLPRKTHK RKVACIGAWHP RV+FTVARAGQKG+H
Sbjct: 168 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 227
Query: 474 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 295
HRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 228 HRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 284
Query: 294 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 115
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D
Sbjct: 285 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRD 344
Query: 114 RIREEAA 94
+ E A
Sbjct: 345 FLAEAEA 351
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 34.7 bits (76), Expect = 0.067
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 669 FAQG*MIXCIGVXRAKGYQGVTXRWHTKKLP-RKTHKXXRKVACIGAWHPXRVSFTVARA 493
F G + G G+QG RW + P R+T K R++ +G+ R+
Sbjct: 218 FGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMP 277
Query: 492 GQKGYHHRTEMNKKIYRI 439
G GY RT +I RI
Sbjct: 278 GHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,347,895
Number of Sequences: 27780
Number of extensions: 345740
Number of successful extensions: 835
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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