Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_I07
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0612 + 26611743-26611878,26612211-26612340,26613243-26613798     30   1.7  
06_03_1172 - 28147957-28148274,28149362-28149877                       29   3.8  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    29   5.1  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    28   8.8  
07_01_0671 + 5036069-5037670                                           28   8.8  
02_04_0400 - 22608519-22608844,22609044-22609122                       28   8.8  

>04_04_0612 + 26611743-26611878,26612211-26612340,26613243-26613798
          Length = 273

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 168 AYPGDLCQESPGRSQADRERLAAQATAEEERQG 70
           A P D+   SP RS+  +ER+AA   A  E  G
Sbjct: 128 AEPADVVTGSPNRSETGQERVAADRPASSESSG 160


>06_03_1172 - 28147957-28148274,28149362-28149877
          Length = 277

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +1

Query: 595 GGGXSXXXPQXPLXLXPXXPXXXXXPLPPPXXXSXPXXP 711
           GGG     P  P  + P  P     P PPP   + P  P
Sbjct: 7   GGGAPPPPPPSPPSVYPFLPPATFIPPPPPAATAEPYAP 45


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = -3

Query: 731 GXXGXGXGXXGXXXXXGGGXGXXQXXGXXGXXXXGXW 621
           G  G G G  G     GGG G  +  G  G    G W
Sbjct: 92  GGGGGGYGGGGGGGRGGGGGGGGRGGGGRGGGRDGDW 128


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = +1

Query: 607 SXXXPQXPLXLXPXXPXXXXXPLPPPXXXSXPXXPXPXPXXP 732
           S   PQ P+      P     P PPP   + P  P P    P
Sbjct: 568 SPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGP 609


>07_01_0671 + 5036069-5037670
          Length = 533

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 188 CHIDPWQWWTFLGLPLMTSRLMPRRFLYAXSL 283
           C +  W+ WTF  L  + S L P  FL A  L
Sbjct: 19  CRVVRWRRWTFASLGALLSNLGPVWFLIAPLL 50


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/45 (33%), Positives = 15/45 (33%)
 Frame = -3

Query: 731 GXXGXGXGXXGXXXXXGGGXGXXQXXGXXGXXXXGXWGXXXEXPP 597
           G  G G G  G     GGG G     G  G    G  G     PP
Sbjct: 52  GGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPP 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,041,338
Number of Sequences: 37544
Number of extensions: 279676
Number of successful extensions: 888
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)