Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_I07
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70783-3|CAA94853.4|  755|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81528-8|CAB04288.2|  643|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z70783-3|CAA94853.4|  755|Caenorhabditis elegans Hypothetical
           protein ZK856.5 protein.
          Length = 755

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +2

Query: 170 WSAVYSCHIDPWQWWTFLGLPLMTSRLMPRRFLYAXSLVTLGNQPFRIGKGLEKSA 337
           W+     HID + W   L     T+ L+  RF     L T GN  +    G E  +
Sbjct: 90  WTGDNVAHIDGYGWEIVLDAVNQTTSLLFSRFPNQTILPTFGNHDYAPSNGFESES 145


>Z81528-8|CAB04288.2|  643|Caenorhabditis elegans Hypothetical
           protein F35E2.9 protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 223 WATLDDVTSNASSLSVRXFARYFGQPTFPDRERFGK-VCXPAGICXLPP 366
           +  L +V  N   ++V  FA    Q TF       K +C P GIC LPP
Sbjct: 230 YGILTNVVDN--KMTVMAFAASDDQNTFYTMSFLYKSLCEPTGICSLPP 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,898,163
Number of Sequences: 27780
Number of extensions: 199318
Number of successful extensions: 468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)