Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_I04
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.022
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.022
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 0.63
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 0.63
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 0.63
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.1
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 2.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/90 (27%), Positives = 26/90 (28%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXPPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXX 502
PP G PP PP PP PP P G P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 503 XXXPPXXXXSSXGXRXXXGFPXPPXXPXXF 592
PP G + G P PP P F
Sbjct: 767 GCPPPPPPPPPGGFK---GGPPPPPPPGMF 793
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 383 PPXXPP-RXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXG 559
PP PP PP P P G PP PP PP G
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGG 767
Query: 560 FPXPPXXPXXFGXXGXPXSXSP 625
P PP P G G P P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +3
Query: 285 GGPXF*KXXGKXPPXPGG-XXPPPXXXXXXXXXXPPXXXPXXXXXPPRXXXXXXXXXAXP 461
GGP G PP GG PPP PP P PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 462 PPXXP 476
PP P
Sbjct: 784 PPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/90 (27%), Positives = 26/90 (28%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXPPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXX 502
PP G PP PP PP PP P G P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 503 XXXPPXXXXSSXGXRXXXGFPXPPXXPXXF 592
PP G + G P PP P F
Sbjct: 767 GCPPPPPPPPPGGFK---GGPPPPPPPGMF 793
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 383 PPXXPP-RXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXG 559
PP PP PP P P G PP PP PP G
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGG 767
Query: 560 FPXPPXXPXXFGXXGXPXSXSP 625
P PP P G G P P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +3
Query: 285 GGPXF*KXXGKXPPXPGG-XXPPPXXXXXXXXXXPPXXXPXXXXXPPRXXXXXXXXXAXP 461
GGP G PP GG PPP PP P PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 462 PPXXP 476
PP P
Sbjct: 784 PPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/90 (27%), Positives = 26/90 (28%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXPPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXX 502
PP G PP PP PP PP P G P PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 503 XXXPPXXXXSSXGXRXXXGFPXPPXXPXXF 592
PP G + G P PP P F
Sbjct: 350 GCPPPPPPPPPGGFK---GGPPPPPPPGMF 376
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 383 PPXXPP-RXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXG 559
PP PP PP P P G PP PP PP G
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGG 350
Query: 560 FPXPPXXPXXFGXXGXPXSXSP 625
P PP P G G P P
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +3
Query: 285 GGPXF*KXXGKXPPXPGG-XXPPPXXXXXXXXXXPPXXXPXXXXXPPRXXXXXXXXXAXP 461
GGP G PP GG PPP PP P PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 462 PPXXP 476
PP P
Sbjct: 367 PPPPP 371
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = +2
Query: 383 PPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXGF 562
PP PP P P PP + PP PP S G G
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 563 PXPPXXPXXFGXXGXPXSXSPXVP 634
P PP P G P P P
Sbjct: 334 P-PPPPPGMRYPGGMPPPPPPRYP 356
Score = 31.1 bits (67), Expect = 0.84
Identities = 27/105 (25%), Positives = 27/105 (25%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXPPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXX 502
PP G P S PP PP P P PP PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP-------GMPGMPPPPPPSRFGPPGM 330
Query: 503 XXXPPXXXXSSXGXRXXXGFPXPPXXPXXFGXXGXPXSXSPXVPP 637
PP G R G P PP G P PP
Sbjct: 331 GGMPP---PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/93 (26%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Frame = +1
Query: 337 GXXPPPXXXLXXX----QXPPXXPXPXXPXXXPXPXXXXXXXXXXPPPXXXXAXRXPXXX 504
G PPP + Q PP P P P P PPP P
Sbjct: 242 GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP--- 298
Query: 505 XXAPXXXXVLXGXPXXPXXPGXPXXPSRXRXXG 603
P G P P P P PSR G
Sbjct: 299 -PPPPPPGRTPGPPGMPGMP-PPPPPSRFGPPG 329
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = +2
Query: 383 PPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXGF 562
PP PP P P PP + PP PP S G G
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 563 PXPPXXPXXFGXXGXPXSXSPXVP 634
P PP P G P P P
Sbjct: 344 P-PPPPPGMRYPGGMPPPPPPRYP 366
Score = 31.1 bits (67), Expect = 0.84
Identities = 27/105 (25%), Positives = 27/105 (25%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXPPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXX 502
PP G P S PP PP P P PP PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP-------GMPGMPPPPPPSRFGPPGM 340
Query: 503 XXXPPXXXXSSXGXRXXXGFPXPPXXPXXFGXXGXPXSXSPXVPP 637
PP G R G P PP G P PP
Sbjct: 341 GGMPP---PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/93 (26%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Frame = +1
Query: 337 GXXPPPXXXLXXX----QXPPXXPXPXXPXXXPXPXXXXXXXXXXPPPXXXXAXRXPXXX 504
G PPP + Q PP P P P P PPP P
Sbjct: 252 GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP--- 308
Query: 505 XXAPXXXXVLXGXPXXPXXPGXPXXPSRXRXXG 603
P G P P P P PSR G
Sbjct: 309 -PPPPPPGRTPGPPGMPGMP-PPPPPSRFGPPG 339
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 4/105 (3%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXP----PXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXX 490
PP G PP + P P PP PP P PP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 491 PPXXXXXPPXXXXSSXGXRXXXGFPXPPXXPXXFGXXGXPXSXSP 625
PP PP S G P PP P + SP
Sbjct: 307 PPTGSLPPPQAGGSP--PPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 312 GKXPPXPGGXXPPPXXXXXXXXXXPPXXXPXXXXXPP 422
G PP P G PPP PP P PP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +2
Query: 395 PPRXXPPXXPXPXXXXXXXGXX-PPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXGFPXP 571
PP PP P P G PP PP PP S G P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 572 P 574
P
Sbjct: 292 P 292
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +2
Query: 383 PPXXPPRXXPPXX-PXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXG 559
PP PP+ PP G PP PP PP S R G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 295
Query: 560 FPXPPXXP 583
P PP P
Sbjct: 296 SPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 4/105 (3%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXP----PXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXX 490
PP G PP + P P PP PP P PP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 491 PPXXXXXPPXXXXSSXGXRXXXGFPXPPXXPXXFGXXGXPXSXSP 625
PP PP S G P PP P + SP
Sbjct: 328 PPTGSLPPPQAGGSP--PPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 312 GKXPPXPGGXXPPPXXXXXXXXXXPPXXXPXXXXXPP 422
G PP P G PPP PP P PP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +2
Query: 395 PPRXXPPXXPXPXXXXXXXGXX-PPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXGFPXP 571
PP PP P P G PP PP PP S G P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 572 P 574
P
Sbjct: 313 P 313
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +2
Query: 383 PPXXPPRXXPPXX-PXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXG 559
PP PP+ PP G PP PP PP S R G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 316
Query: 560 FPXPPXXP 583
P PP P
Sbjct: 317 SPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 4/105 (3%)
Frame = +2
Query: 323 PPXRGXXXPPXXXXSXXXXXP----PXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXX 490
PP G PP + P P PP PP P PP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 491 PPXXXXXPPXXXXSSXGXRXXXGFPXPPXXPXXFGXXGXPXSXSP 625
PP PP S G P PP P + SP
Sbjct: 313 PPTGSLPPPQAGGSP--PPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 312 GKXPPXPGGXXPPPXXXXXXXXXXPPXXXPXXXXXPP 422
G PP P G PPP PP P PP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +2
Query: 395 PPRXXPPXXPXPXXXXXXXGXX-PPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXGFPXP 571
PP PP P P G PP PP PP S G P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 572 P 574
P
Sbjct: 298 P 298
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +2
Query: 383 PPXXPPRXXPPXX-PXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXXG 559
PP PP+ PP G PP PP PP S R G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 301
Query: 560 FPXPPXXP 583
P PP P
Sbjct: 302 SPPPPPPP 309
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/86 (26%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +2
Query: 383 PPXXP--PRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXX 556
PP P P PP P P G P P P G +
Sbjct: 122 PPQQPCEPTTPPPCQPCPQGPPGPPGQ--PGIPGDNGPPGEQGPKGPDAAPGEPGPKGPI 179
Query: 557 GFPXPPXXPXXFGXXGXPXSXSPXVP 634
G P PP G G P P VP
Sbjct: 180 GPPGPPGQAGAPGEPGSPAKSEPAVP 205
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/86 (24%), Positives = 23/86 (26%)
Frame = +1
Query: 331 PGGXXPPPXXXLXXXQXPPXXPXPXXPXXXPXPXXXXXXXXXXPPPXXXXAXRXPXXXXX 510
PG PP PP P P P P P P P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP--GEP 183
Query: 511 APXXXXVLXGXPXXPXXPGXPXXPSR 588
P G P P PG P P++
Sbjct: 184 GPKGPPGPPGAPGAPGTPGEPGVPAQ 209
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +2
Query: 383 PPXXP--PRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXX 556
PP P P PP P P G PP P G +
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPG--PPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPP 189
Query: 557 GFPXPPXXPXXFGXXGXPXSXSPXVP 634
G P P P G G P P +P
Sbjct: 190 GPPGAPGAPGTPGEPGVPAQSEPLIP 215
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/86 (24%), Positives = 23/86 (26%)
Frame = +1
Query: 331 PGGXXPPPXXXLXXXQXPPXXPXPXXPXXXPXPXXXXXXXXXXPPPXXXXAXRXPXXXXX 510
PG PP PP P P P P P P P
Sbjct: 126 PGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP--GEP 183
Query: 511 APXXXXVLXGXPXXPXXPGXPXXPSR 588
P G P P PG P P++
Sbjct: 184 GPKGPPGPPGAPGAPGTPGEPGVPAQ 209
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +2
Query: 383 PPXXP--PRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXPPXXXXSSXGXRXXX 556
PP P P PP P P G PP P G +
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPG--PPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPP 189
Query: 557 GFPXPPXXPXXFGXXGXPXSXSPXVP 634
G P P P G G P P +P
Sbjct: 190 GPPGAPGAPGTPGEPGVPAQSEPLIP 215
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 1/95 (1%)
Frame = -1
Query: 602 PXXRXREGXXGXPGXXGXXGXPXRTXXXXGAXXXXX-GXRXAXXXXGGGXXXXXXXXXXG 426
P R G G PG G G P G+ G GG G
Sbjct: 34 PFFGGRSGGWGRPGWGG--GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGG 91
Query: 425 XGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
G G G G GG GGG G GG
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 383 PPXXPPRXXPPXXPXPXXXXXXXGXXPPXXXXQXXXPPXXXXXP--PXXXXSSXGXRXXX 556
PP P P P G PP + PP P P G
Sbjct: 99 PPGTPGSAGRPGKPGAPGLNGNPGR-PPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNK 157
Query: 557 GFPXPPXXPXXFGXXGXPXSXSPXVPP 637
G PP P G G P + P PP
Sbjct: 158 GPLGPPGPPGPEGPNGEPGNKGPAGPP 184
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/81 (24%), Positives = 20/81 (24%)
Frame = +1
Query: 331 PGGXXPPPXXXLXXXQXPPXXPXPXXPXXXPXPXXXXXXXXXXPPPXXXXAXRXPXXXXX 510
PG PP PP P P P P P P P
Sbjct: 131 PGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPP--GEA 188
Query: 511 APXXXXVLXGXPXXPXXPGXP 573
P G P P PG P
Sbjct: 189 GPKGPPGPPGSPGAPGEPGRP 209
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -1
Query: 581 GXXGXPGXXGXXGXPXRTXXXXGAXXXXXGXRXAXXXXGGGXXXXXXXXXXGXGXXXGXX 402
G G G G P G G GGG G G G
Sbjct: 97 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGC 156
Query: 401 GXGXXGGXXXXXXXXXGGGXXPPGXGG 321
G G G GGG G GG
Sbjct: 157 GGGGGGCGGGGGGCGGGGGGGCGGGGG 183
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -1
Query: 581 GXXGXPGXXGXXGXPXRTXXXXGAXXXXXGXRXAXXXXGGGXXXXXXXXXXGXGXXXGXX 402
G G G G G G G GGG G G G
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 127
Query: 401 GXGXXGGXXXXXXXXXGGGXXPPGXGG 321
G G G GGG G GG
Sbjct: 128 GCGGGCGGGGGGGCGGGGGGGCGGGGG 154
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 467 GGGXXXXXXXXXXGXGXXXGXXGXGXXGGXXXXXXXXXGGGXXPPGXGG 321
GGG G G G G G GG GGG G GG
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,811,572
Number of Sequences: 27780
Number of extensions: 150335
Number of successful extensions: 1275
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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