Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_H24
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.                   31   7.4  
BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.         31   7.4  
BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3...    31   7.4  
BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3...    31   7.4  
AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeat...    31   7.4  
AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeat...    31   7.4  
AB029008-1|BAA83037.1|  584|Homo sapiens KIAA1085 protein protein.     31   7.4  
BC012317-1|AAH12317.1|  137|Homo sapiens LINCR protein protein.        30   9.8  

>U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.
          Length = 870

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 23/75 (30%), Positives = 29/75 (38%)
 Frame = +3

Query: 33  P*ACGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILR 212
           P +  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+   
Sbjct: 260 PLSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYV 319

Query: 213 QHGFGQCVEQRPLVP 257
            H       +RPL P
Sbjct: 320 DHNTKTTTWERPLPP 334


>BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.
          Length = 870

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 23/75 (30%), Positives = 29/75 (38%)
 Frame = +3

Query: 33  P*ACGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILR 212
           P +  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+   
Sbjct: 260 PLSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYV 319

Query: 213 QHGFGQCVEQRPLVP 257
            H       +RPL P
Sbjct: 320 DHNTKTTTWERPLPP 334


>BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 870

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 23/75 (30%), Positives = 29/75 (38%)
 Frame = +3

Query: 33  P*ACGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILR 212
           P +  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+   
Sbjct: 260 PLSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYV 319

Query: 213 QHGFGQCVEQRPLVP 257
            H       +RPL P
Sbjct: 320 DHNTKTTTWERPLPP 334


>BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 335

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 23/75 (30%), Positives = 29/75 (38%)
 Frame = +3

Query: 33  P*ACGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILR 212
           P +  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+   
Sbjct: 260 PLSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYV 319

Query: 213 QHGFGQCVEQRPLVP 257
            H       +RPL P
Sbjct: 320 DHNTKTTTWERPLPP 334


>AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeats
            single KH domain protein isoform 2 protein.
          Length = 2617

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 151  GMPAASGRRCSPTASTMAPCXXXXXXXRSRVSLEGPQAYGVPSFH 17
            G+P+      SP++S+ AP         +RV L+GP   G PSF+
Sbjct: 2284 GLPSIDPSGSSPSSSS-APLASFSGIPGTRVFLQGPAPVGTPSFN 2327


>AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeats
            single KH domain protein isoform 1 protein.
          Length = 2542

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 151  GMPAASGRRCSPTASTMAPCXXXXXXXRSRVSLEGPQAYGVPSFH 17
            G+P+      SP++S+ AP         +RV L+GP   G PSF+
Sbjct: 2284 GLPSIDPSGSSPSSSS-APLASFSGIPGTRVFLQGPAPVGTPSFN 2327


>AB029008-1|BAA83037.1|  584|Homo sapiens KIAA1085 protein protein.
          Length = 584

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 151 GMPAASGRRCSPTASTMAPCXXXXXXXRSRVSLEGPQAYGVPSFH 17
           G+P+      SP++S+ AP         +RV L+GP   G PSF+
Sbjct: 324 GLPSIDPSGSSPSSSS-APLASFSGIPGTRVFLQGPAPVGTPSFN 367


>BC012317-1|AAH12317.1|  137|Homo sapiens LINCR protein protein.
          Length = 137

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 38  SLWPLEGYSRAAATCSSSTWCHCAGGRRAAPA*SCGHSRSEMSASRRRLSAP 193
           S+W  E   R AA  ++S W   A   RA P  +C  S +    SR R   P
Sbjct: 39  SVWRCECCGRRAAGAAASAWASRAWTPRACPCPACRPSCAPTWRSRARRGRP 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,730,036
Number of Sequences: 237096
Number of extensions: 2582553
Number of successful extensions: 5012
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5012
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)