Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_H17
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 91 6e-19
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 49 3e-06
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 38 0.006
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 38 0.010
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 38 0.010
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.018
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 35 0.055
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 35 0.055
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 32 0.39
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.68
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 31 0.90
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 30 1.6
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 30 2.1
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 29 4.8
U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine recept... 28 8.4
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 28 8.4
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 91.5 bits (217), Expect = 6e-19
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Frame = -2
Query: 685 LVGIGVAFLMNWTMVKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 506
L+ +G + + V D+L P + +V+G++ ++ FLGCCGAIRE++C+ V++A
Sbjct: 27 LIIVGSILQLKFDNVLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFA 86
Query: 505 XXXXXXXXXXXXXXXXLFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFE 326
+ +S + I + + + ++ E+A + + + FE
Sbjct: 87 VLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESA---WDKTHQLFE 143
Query: 325 CCGNTDAINYGQF-TLPESCCVKKSILSTFAGNNCTVDAANPGCGPKIGELYQKWNKPIA 149
CCG T++ ++ F T+P+SCC+++ + A N + PGC + + K +
Sbjct: 144 CCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL--FEPGCIHSVEQWVLKNGAMVG 199
Query: 148 GVALGVACVEVVGALFALCLANSI 77
G+ +A +++VG FA CL+ SI
Sbjct: 200 GICAVLAAIQLVGVCFACCLSKSI 223
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 49.2 bits (112), Expect = 3e-06
Identities = 43/175 (24%), Positives = 68/175 (38%)
Frame = -2
Query: 604 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 425
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 424 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTDAINYGQFTLPESCCVKKSILS 245
I + KK S A +Q F+CCG T A ++ + + C + +
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT-AQTQNRY-IQDGLCGPEPL-- 177
Query: 244 TFAGNNCTVDAANPGCGPKIGELYQKWNKPIAGVALGVACVEVVGALFALCLANS 80
+A C +I + Q W + I VA + +E+ LF+ L S
Sbjct: 178 ----------SAPVNCFDRISHMVQSWGESIVVVAFLLLAIELFAILFSCILCRS 222
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = -2
Query: 604 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 425
+I IV+GAVM V+A LGCCG S ++ Y+ L + +
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174
Query: 424 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTDAINYGQF--TLPESCCVK 260
+ D + + + + LQ F CCGN ++ F +P SC ++
Sbjct: 175 LSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/96 (22%), Positives = 41/96 (42%)
Frame = -2
Query: 604 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 425
W + GA++ ++ + GC GA + + C + + LF E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 424 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 317
+ + + R +++ A + F +Q +FECCG
Sbjct: 118 VESSMYDTIRNR--YSSETAFKDAFDTVQEKFECCG 151
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 38.3 bits (85), Expect = 0.006
Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 30/212 (14%)
Frame = -2
Query: 619 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGE 440
L ++ +V G ++ FLG CGA+ S +++ + Y +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 439 ---SIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGN---TDAIN--YGQFT 284
S+KE++ + V + + ++ +LQ +CCG+ TD I+ + Q T
Sbjct: 83 KVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWSQST 142
Query: 283 -----------LPESCCVK---KSILSTFAGN--NCTVDAANP------GCGPKIGELYQ 170
P SCC + S L+ A + C AN GC ++ +
Sbjct: 143 NQDSEEIESPLFPVSCCTQITGASALNPLAKSYARCQQIGANRQWRHAVGCSERLMSWFN 202
Query: 169 KWNKPIAGVALGVACVEVVGALFALCLANSIR 74
+ G G A ++G + CL + IR
Sbjct: 203 EQIWIFVGFGFGSALTMMLGICLSCCLISKIR 234
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 37.5 bits (83), Expect = 0.010
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Frame = -2
Query: 685 LVGIGVAFLMNWTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMV 518
LVG+G+ L + +KD + L + P I I + G + V++F G GA+R++ ++
Sbjct: 43 LVGVGILALGVYLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLL 102
Query: 517 VTYAXXXXXXXXXXXXXXXXLFT-YGESIKESIMDGVGVLFKKRSDANADEAAEAVFSEL 341
+A FT + E + +L+ ++ AE + L
Sbjct: 103 KCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDAL 161
Query: 340 QRQFECCG-NTDAINYGQFTL------------PESC-----CVKKSILSTFAGNN 227
Q ECCG ++ A Y + + PE C C +KS++S AG++
Sbjct: 162 QENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAGSS 217
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 37.5 bits (83), Expect = 0.010
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Frame = -2
Query: 685 LVGIGVAFLMNWTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMV 518
LVG+G+ L + +KD + L + P I I + G + V++F G GA+R++ ++
Sbjct: 67 LVGVGILALGVYLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLL 126
Query: 517 VTYAXXXXXXXXXXXXXXXXLFT-YGESIKESIMDGVGVLFKKRSDANADEAAEAVFSEL 341
+A FT + E + +L+ ++ AE + L
Sbjct: 127 KCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDAL 185
Query: 340 QRQFECCG-NTDAINYGQFTL------------PESC-----CVKKSILSTFAGNN 227
Q ECCG ++ A Y + + PE C C +KS++S AG++
Sbjct: 186 QENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAGSS 241
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 604 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 506
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 35.1 bits (77), Expect = 0.055
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = -2
Query: 685 LVGIGVAFLMNW------TMVKDLLK-THLAVGP-WIFIVVGAVMFVIAFLGCCGAIRES 530
L+G G+ W T V L K + L + P W ++VG + F+I F GC G++RE+
Sbjct: 51 LLGFGLLLFGVWAQIEKNTFVNMLSKASKLYLDPTWPLLIVGFLTFIIGFSGCVGSLREN 110
Query: 529 HCMVVTYA 506
+ Y+
Sbjct: 111 TSFLTFYS 118
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.1 bits (77), Expect = 0.055
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 604 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 506
++ V G ++ V+AFLGCCGA +E ++ Y+
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 281 QRELAVVDSVSVTAAFELSLQFREDSLGGLVCVSVGSLFE*HADAIHNALLDALAVGEEE 460
Q E A+ + V +L+L +E+SL ++ SV + E H + LD +
Sbjct: 37 QIENALSEIVGDQPPHDLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQS 93
Query: 461 DADHHLHN-DDHQQEDCVRDDH 523
DHH+HN ++H+ + DH
Sbjct: 94 GHDHHIHNNEEHKHHNMRSHDH 115
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 408 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 581
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 582 APTTMK 599
PTTMK
Sbjct: 213 TPTTMK 218
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/125 (20%), Positives = 45/125 (36%)
Frame = -2
Query: 643 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 464
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIG 118
Query: 463 XXLFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTDAINYGQFT 284
+ S++ ++ + V F A+A S ++ CCG + N F
Sbjct: 119 ITVLVKRRSVRRTVKEYVFDSFNMN--------AQADISAFNFRYNCCGAENLPNLNCFA 170
Query: 283 LPESC 269
+C
Sbjct: 171 GQPTC 175
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 455 EEDADHHLHNDDHQQEDCVRDDH 523
EE DHH H+ DH E +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 3/126 (2%)
Frame = -2
Query: 685 LVGIGVAFLMNWTMVKDLLKTHLAVG-PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 509
+VG G+ L + ++ T+L V P++ I+VG + FV+ + I + +++T+
Sbjct: 110 IVGFGIQTLREVSFTASVIGTNLIVYCPYLLILVGILSFVMTPVRFFSIILNDNKIMITH 169
Query: 508 AXXXXXXXXXXXXXXXXLFTYGESIKESIMDGVGVLFKKRSDANADEAAEAV--FSELQR 335
+ + S M+ + + D A + +++ R
Sbjct: 170 MFATIFFATICAMTAILGYDLNSHVSSSDMEH-WMKHSIKEDYGNPTAPHIMEEWNKAHR 228
Query: 334 QFECCG 317
QF+CCG
Sbjct: 229 QFKCCG 234
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 461 DADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEH 577
D DHH H+D+H ED +H + A D +H
Sbjct: 10 DGDHHDHHDEHHHED--HHEHGADGEHVHHAGDHCDTQH 46
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 567 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 680
I N+T P+ +IH + +W+ + T Q +N P+P
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLP 388
>U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine receptor
protein 1, isoformd protein.
Length = 212
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 78 MELARHSANRAPTTSTQATPR 140
M ++RH + R+ TT+T ATPR
Sbjct: 1 MTVSRHYSRRSTTTTTTATPR 21
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 78 MELARHSANRAPTTSTQATPR 140
M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,027,355
Number of Sequences: 27780
Number of extensions: 299562
Number of successful extensions: 1229
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -