Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_H13
(724 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 187 2e-47
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 187 2e-47
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 187 2e-47
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 187 2e-47
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 30 3.7
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 30 3.7
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 187 bits (455), Expect = 2e-47
Identities = 102/185 (55%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Frame = -2
Query: 678 QRNXFFXXXFIPTKISRVLLKSSTMYTX*SPVXKVGAXEATLLNMLNISPFSYGLVVKQV 499
++ FF IPTKIS+ ++ P KVGA EATLLNMLNISPFSYGL+V QV
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQV 192
Query: 498 YDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXX 319
YDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 193 YDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIA 252
Query: 318 XXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMG 142
IKE+IKDPSKF DDDMG
Sbjct: 253 ATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMG 312
Query: 141 FGLFD 127
FGLFD
Sbjct: 313 FGLFD 317
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 721 PXQLSFPPXXTGLGPEKXXFXXXF-YPYQDFKGTIEIINDVHXLKPG 584
P + P TGLGPEK F P + KGTIEIINDV LKPG
Sbjct: 118 PLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 187 bits (455), Expect = 2e-47
Identities = 102/185 (55%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Frame = -2
Query: 678 QRNXFFXXXFIPTKISRVLLKSSTMYTX*SPVXKVGAXEATLLNMLNISPFSYGLVVKQV 499
++ FF IPTKIS+ ++ P KVGA EATLLNMLNISPFSYGL+V QV
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQV 192
Query: 498 YDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXX 319
YDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 193 YDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIA 252
Query: 318 XXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMG 142
IKE+IKDPSKF DDDMG
Sbjct: 253 ATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMG 312
Query: 141 FGLFD 127
FGLFD
Sbjct: 313 FGLFD 317
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 721 PXQLSFPPXXTGLGPEKXXFXXXF-YPYQDFKGTIEIINDVHXLKPG 584
P + P TGLGPEK F P + KGTIEIINDV LKPG
Sbjct: 118 PLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 187 bits (455), Expect = 2e-47
Identities = 102/185 (55%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Frame = -2
Query: 678 QRNXFFXXXFIPTKISRVLLKSSTMYTX*SPVXKVGAXEATLLNMLNISPFSYGLVVKQV 499
++ FF IPTKIS+ ++ P KVGA EATLLNMLNISPFSYGL+V QV
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQV 192
Query: 498 YDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXX 319
YDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 193 YDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIA 252
Query: 318 XXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMG 142
IKE+IKDPSKF DDDMG
Sbjct: 253 ATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMG 312
Query: 141 FGLFD 127
FGLFD
Sbjct: 313 FGLFD 317
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 721 PXQLSFPPXXTGLGPEKXXFXXXF-YPYQDFKGTIEIINDVHXLKPG 584
P + P TGLGPEK F P + KGTIEIINDV LKPG
Sbjct: 118 PLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 187 bits (455), Expect = 2e-47
Identities = 102/185 (55%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Frame = -2
Query: 678 QRNXFFXXXFIPTKISRVLLKSSTMYTX*SPVXKVGAXEATLLNMLNISPFSYGLVVKQV 499
++ FF IPTKIS+ ++ P KVGA EATLLNMLNISPFSYGL+V QV
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQV 192
Query: 498 YDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXX 319
YDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL
Sbjct: 193 YDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIA 252
Query: 318 XXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMG 142
IKE+IKDPSKF DDDMG
Sbjct: 253 ATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMG 312
Query: 141 FGLFD 127
FGLFD
Sbjct: 313 FGLFD 317
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 721 PXQLSFPPXXTGLGPEKXXFXXXF-YPYQDFKGTIEIINDVHXLKPG 584
P + P TGLGPEK F P + KGTIEIINDV LKPG
Sbjct: 118 PLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -2
Query: 540 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 361
+I F +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 802 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 858
Query: 360 HSIANGFKNL 331
H + FKN+
Sbjct: 859 HVSIDKFKNM 868
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -2
Query: 540 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 361
+I F +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 565 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 621
Query: 360 HSIANGFKNL 331
H + FKN+
Sbjct: 622 HVSIDKFKNM 631
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,534,295
Number of Sequences: 53049
Number of extensions: 461504
Number of successful extensions: 985
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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