Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_H13
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   143   1e-34

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  143 bits (347), Expect = 1e-34
 Identities = 80/184 (43%), Positives = 103/184 (55%)
 Frame = -2

Query: 678 QRNXFFXXXFIPTKISRVLLKSSTMYTX*SPVXKVGAXEATLLNMLNISPFSYGLVVKQV 499
           ++  FF    IPTKI+R  ++            KVGA E+ LLNML ++PFSYGLVV+QV
Sbjct: 133 EKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQV 192

Query: 498 YDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXX 319
           YD GT++ PE+LD+  E+LR +F +GV NVA++SLA+ YPT+AS  HS+ANG +N+L   
Sbjct: 193 YDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVA 252

Query: 318 XXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGF 139
                       IK FI DPSKF                              SDDDMGF
Sbjct: 253 AVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGF 308

Query: 138 GLFD 127
           GLFD
Sbjct: 309 GLFD 312



 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -1

Query: 721 PXQLSFPPXXTGLGPEKXXFXXXF-YPYQDFKGTIEIINDVHXLKPG 584
           P  +  PP  TG+GPEK  F      P +  +GTIEI+NDVH +K G
Sbjct: 118 PCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEG 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,713,082
Number of Sequences: 27780
Number of extensions: 226729
Number of successful extensions: 558
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)