Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_H10
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 32 0.46
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.4
02_05_1104 + 34146610-34146614,34147108-34147231,34147480-341475... 29 2.4
02_05_1101 + 34122061-34122065,34122559-34122682,34122931-341229... 29 2.4
01_01_0083 + 631196-631675 29 2.4
01_05_0751 + 24904854-24905640,24905747-24905805 29 3.2
01_01_0082 + 625198-625719 29 3.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 4.3
02_05_0686 - 30900748-30902167,30903442-30904742 28 5.6
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 5.6
10_01_0184 + 2064135-2064150,2064438-2064485,2065541-2065806,206... 27 9.9
07_03_0600 + 19866757-19867218,19867920-19868429 27 9.9
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 27 9.9
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 334 SGGXGKKKFXPXSPGVGGENPKXXXFFFXPPPXXXXXGGKXGFXGKXPPPXXGGGVF 504
S G G SP GG P + PP GG G+ G P P GGG +
Sbjct: 90 SHGGGPSGGALPSPSHGGAAPSHGGGYGASPPVTPSPGG--GYGGGSPAPSHGGGAY 144
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +1
Query: 322 PLXXSGGXGKKKFXPXSPGVGGENPKXXXFFFXPPPXXXXXGGKXGFXGKXPPPXXGGGV 501
P+ GG P G+GG P PP G F G PPP GGV
Sbjct: 1126 PIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAG---FRGGTPPPNAHGGV 1182
Query: 502 FXXXXP 519
P
Sbjct: 1183 APPPPP 1188
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/74 (32%), Positives = 25/74 (33%)
Frame = -3
Query: 526 PPXGGXXKKPPPXXXGGXFXPXXXXFPXXGXXGGGXQKKXXXFWGFPPPXXGKXGXIFFS 347
PP G PPP GG P P G G G PP G G
Sbjct: 1165 PPAGFRGGTPPPNAHGGVAPPPP---PPRGHGGVGGPPTPPGAPA-PPMPPGVPGG---P 1217
Query: 346 PAPXKXXGVPXPPG 305
P P G+P PPG
Sbjct: 1218 PPPPGGRGLPAPPG 1231
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = -3
Query: 526 PPXGGXXKKPPPXXXGGXFXPXXXXF-PXXGXXGGGXQKKXXXFWGFPPPXXGKXGXIFF 350
PP GG PPP GG P GG G PP G
Sbjct: 1113 PPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGG 1172
Query: 349 SPAPXKXXGVPXPP 308
+P P GV PP
Sbjct: 1173 TPPPNAHGGVAPPP 1186
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 479 GGXXPXXPXFPPXXXKXGGGXKKKXXFLGFSPPTPGEXGXNFFFPXPP 336
GG P P PP G G PP P G P PP
Sbjct: 1079 GGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPP 1126
Score = 27.9 bits (59), Expect = 7.5
Identities = 29/110 (26%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
Frame = -2
Query: 524 PXGXXXXKTPPPKXGGGXXPXXPXFPPXXXKXGG-GXKKKXXFLGFSPPTPGEXGXNFFF 348
P G PPP GG P PP GG LG P P G F
Sbjct: 1114 PPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAG--FRG 1171
Query: 347 PXPPEXXRGSXTPXXRFXNX*TXIFFPSXKXGKNXXPGFXGXKXXPPXDP 198
PP G P + P G P G PP P
Sbjct: 1172 GTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 305 PXGXGN--PXXFXGGXGKKNXPXFPXXWGGKTPKXXXFFLXPPPXXPXXGEXXXXGXKXP 478
P G G P GG G P P + G TP PP P G G P
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTP 1201
Query: 479 P 481
P
Sbjct: 1202 P 1202
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 422 PPPXXPXXGEXXXXGXKXPPPXXGGGF-FXXXXPGGXXXXPP 544
PPP P G+ G PPP G G PGG PP
Sbjct: 1085 PPPLPPTLGDY---GVAPPPPSIGAGAPPPPPPPGGITGVPP 1123
>02_05_1104 +
34146610-34146614,34147108-34147231,34147480-34147514,
34149924-34150269
Length = 169
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 224 TPXTXGPXFFXFFXKEKKXWFIXSKTGPXGXGNPXXFXGGXGKKNXPXFPXXW 382
T T GP F EKK W S G G G G P W
Sbjct: 32 TECTSGPPLFSLACVEKKRWNCGSGAGDDGCSGVGDDSDGDGSARTPEVEGRW 84
>02_05_1101 +
34122061-34122065,34122559-34122682,34122931-34122965,
34125375-34125720
Length = 169
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 224 TPXTXGPXFFXFFXKEKKXWFIXSKTGPXGXGNPXXFXGGXGKKNXPXFPXXW 382
T T GP F EKK W S G G G G P W
Sbjct: 32 TECTSGPPLFSLACVEKKRWNCGSGAGDDGCSGVGDDSDGDGSARTPEVEGRW 84
>01_01_0083 + 631196-631675
Length = 159
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -1
Query: 525 PPGXXXXKN-PPPXXGGGXFXPKXXFSPXXGXXGGG 421
PP N PPP GGG + P + P G GGG
Sbjct: 68 PPSSSSYWNYPPPQGGGGGYIP--YYQPPAGGGGGG 101
>01_05_0751 + 24904854-24905640,24905747-24905805
Length = 281
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 72 LSGSTPQXPCXGGGWXGGNXXP 137
++ + P PC GGGW G + P
Sbjct: 20 ITATAPATPCGGGGWYGEDEGP 41
>01_01_0082 + 625198-625719
Length = 173
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 525 PPGXXXXKNPPPXXGGGXFXPKXXFSPXXG 436
PP PPP GGG + P ++P G
Sbjct: 85 PPTTPSTNCPPPPYGGGGYNPTPSYNPTPG 114
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +2
Query: 371 PXXWGGKTPKXXXFFLXPPPXXPXXGEXXXXGXKXPPPXXGGGFFXXXXPGGXXXXPP 544
P +GG + PPP P G G PP GG+ PGG P
Sbjct: 340 PSSYGGGPGSYPPSYGAPPPNPPYSG-GAPGGQGSLPPSYDGGYGGRPMPGGGGPGAP 396
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 364 PXSPGVGGENPKXXXFFFXPPPXXXXXGGKXGFXGKXPPPXXGG 495
P GG + PPP GG G G PP GG
Sbjct: 338 PPPSSYGGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGG 381
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -2
Query: 497 PPPKXGGGXXPXXPXFPPXXXKXGGGXKKKXXFLGFSPPTPGEXGXNFFFPXPPEXXRGS 318
PPP P P PP G G SPP P G P PP G+
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP-KGPSPPPPPPPGGKKGGPPPPPPKGGA 386
Query: 317 XTP 309
P
Sbjct: 387 SRP 389
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = -2
Query: 467 PXXPXFPPXXXKXGGGXKKKXXFLGFSPPTPGEXGXNFFFPXPPEXXRGSXTP 309
P P GGG +G SP TPG G + PP G TP
Sbjct: 493 PPSPSSDTSPTTPGGGYYPPTPSIGTSPSTPGTGGGYY----PPSPSTGGYTP 541
>10_01_0184 +
2064135-2064150,2064438-2064485,2065541-2065806,
2065986-2066054,2066429-2066980,2067433-2067453
Length = 323
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 27 VILLTSAEYLCSTPVLSGSTPQXPCXGGGWXGGNXXPSSCT 149
+I AE L S L+G + P GGG GG CT
Sbjct: 221 IIRAALAEALVSFYPLAGRIRELPAAGGGGGGGGKLVVECT 261
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = -3
Query: 526 PPXGGXXKKPPPXXXGGXFXPXXXXFPXXGXXGGGXQKKXXXFWGFPPP 380
PP G ++PPP P + G ++ WG PPP
Sbjct: 28 PPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPPHAPPPQQPPAMWGQPPP 76
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 497 PPPKXGGGXXPXXPXFPP 444
PPP GGG P P PP
Sbjct: 115 PPPAVGGGPDPSPPRCPP 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,105,360
Number of Sequences: 37544
Number of extensions: 423087
Number of successful extensions: 789
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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